Cohnella herbarum: HH215_21755
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Entry
HH215_21755 CDS
T08421
Name
(GenBank) ABC transporter substrate-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_21755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_21755
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
HH215_21755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
Ndc80_HEC
DUF3558
Motif
Other DBs
NCBI-ProteinID:
QJD88280
UniProt:
A0A7Z2ZQP4
LinkDB
All DBs
Position
complement(5078479..5079966)
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AA seq
495 aa
AA seq
DB search
MAASLVLSACGQNDNGGSKDASKETPSASGSSSANPSETKLEPYKITLAYPGTAPRDLAL
VQEEMSKYLTEKINATVELQPIDWGSWTDKTNLMKISGEAFDLIFTAGWYGYAQDVSKGQ
FLELTDLMAEYGKDIPGVLGEDYIKGAQISGKLYGAPTHKEFAQGFGFLLNKDLVEKYKF
NTEGVKTLEEMEEMFKTIKENEPDVVPVVSNRFANTWGAANYDLSGKLPRDSKELKLVDD
LEDPKYIEFMKRMRQWNLNGWFDKDVITSDDSDQAMNMIKARKAFAIGQSLKPGKDAEMS
VTTGVPLVQVETATPYTTTGEANGAMLAISRTSKDPERAMMFLNLLYTDAKLLNMLVWGI
EGKHYVKVSDNVIDYPEGVTAENQGYPNPGGWMFGDQFKTYLWANEDPNKWEQFKKFNDS
SERSIALGFVFDETPVKAEVAATNNVKDEFYKVLNAGAVDVEETLAKYKAKRDAAGMQKI
IQEMQRQLDEWAKTK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcgctggtattgtccgcatgcggccagaacgacaacggaggttctaaagac
gcttccaaagaaacgccatcggcatcgggaagttcgtcggccaatccttccgaaacgaag
cttgagccttataagattacgttagcctaccctggcaccgctccacgcgaccttgcgctc
gtacaagaagaaatgagcaagtatttgacggaaaaaatcaatgcgaccgtcgaactccag
cctatcgattggggctcttggacggataaaacgaacttgatgaaaatttccggagaagcg
ttcgatctcatctttaccgcgggctggtacggttacgcccaggacgtgtccaaagggcag
ttcctggaactgacggacctcatggcagagtacggcaaggatatcccgggcgttctgggc
gaggattacattaaaggggcgcaaatcagcggtaagctctacggcgcgccgacccataag
gaattcgcgcaaggcttcggtttcttattgaacaaggatctggtggagaagtacaagttc
aataccgaaggcgtgaaaacgctagaggaaatggaagaaatgttcaagacgatcaaagaa
aacgagcctgatgtcgttcccgtcgtaagcaaccgtttcgcgaacacttggggtgcggct
aactacgatctatccggcaagttgcctcgcgacagcaaagagcttaaactcgttgacgat
ctcgaagacccgaaatatatcgaattcatgaaacgcatgcgtcaatggaacttgaacgga
tggttcgataaagacgtgatcacttcggacgacagcgaccaagcgatgaatatgattaaa
gctcgcaaagcgtttgctatcggacaatctttgaaacccggcaaagacgcggaaatgtcc
gtaacgacgggcgttcctctagtacaagtcgaaacggcaacgccttatacgactacgggg
gaagccaacggcgcgatgcttgcgatctcccgtacttccaaggatcccgagcgcgcgatg
atgttcttgaacctgctctacacggatgccaagctgcttaacatgcttgtgtgggggatc
gaaggcaagcactacgttaaagtttccgacaatgtaatcgactatccggaaggcgtaacg
gccgagaaccaaggttacccgaatccgggcggttggatgttcggcgatcagttcaaaacg
tatctatgggctaacgaagacccgaacaagtgggagcagttcaaaaaattcaatgacagc
tcggaacgctccatcgctttaggtttcgtgttcgacgaaacgccggtcaaggcggaggtc
gcggcaacgaacaacgttaaagatgagttctataaagttctaaacgccggcgcggtcgat
gtagaagagaccctagcgaagtataaggcgaagcgggacgctgcgggcatgcaaaaaatc
attcaagaaatgcagcgtcaattagatgaatgggccaaaacgaaatag
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