Cohnella herbarum: HH215_22120
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Entry
HH215_22120 CDS
T08421
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cheb
Cohnella herbarum
Pathway
cheb03420
Nucleotide excision repair
cheb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HH215_22120
03430 Mismatch repair
HH215_22120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_22120
Enzymes [BR:
cheb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HH215_22120
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HH215_22120
MMR (mismatch excision repair)
Other MMR factors
HH215_22120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
SLFN-g3_helicase
NACHT
AAA_30
AAA_16
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJD85611
UniProt:
A0A7Z2ZMP8
LinkDB
All DBs
Position
complement(5164270..5166696)
Genome browser
AA seq
808 aa
AA seq
DB search
MINAKDWQQEQERLDLVTEQLRSTIAGLEPEVAGLRDQATDIRKRFWEEVTVNTSTHEDF
EETFYSIKQQEAILSERERSHKLRMQRWKNMKRLLPSPYFGRFDFQEDGLSLSEQIYIGV
SSFVGEDGLSFLVYDWRTPIASLYYDYSPGEAAYETPGGQIAGTMKLKRQYQIRDGQLRN
VFDTSITIGDELLQQVLGKGADAQMKSIVATIQKEQNAIIRNDKSRMLIVQGAAGSGKTS
AALQRVAYLLYKHRDRLRADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLAYWL
GSAFRLEDPFEQIEYVLTAGSTQDYEARLSGIQYKASEAYLLALQSYASWLGKEGMLFRA
IRFRDRELITAEQMKSQFYGYDSNVRLANRVILLREWLLQELTSLERKEREALWVQDELD
YLDNEQYAEAYGELLKKVQREDAVFDFTSEYVEAYGDFRGKEQGEENVFDFAGQEEELLR
RMIVKESFKPLRKDVKRFEFIDTIGLYDQLFDEDATFRQMPNESEVPERWSEICKQTKEK
LGKLELFYEDATPFLYLKELIEGIRTNTEVRHLFVDEGQDYSPFQYAFLKRLFPRARMTV
LGDFGQAIFPQATNLHEADSPLIRLYGEDETNLIRLVRSYRSTREIVEFTRSLLPGEHIV
PFDRGGRKPYLSKVGSGEERTARIIKDLAALEAEGFDSIAIITKTAAESREAYEALTSQG
CEGLRLITKETITFEKGAAVMPAYLAKGVEFDAVLIYDASSQAYNRESERKLFYTACTRA
MHRLLLYATGEWTPYIRALDTTLFEVEQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgcgaaggattggcagcaggaacaagagcgattagacctggttacggaacaa
ttgcgatcgacaatcgccggactagagccggaggtggccgggctgcgcgatcaggcgacg
gacattcgcaaacggttctgggaggaagttacggtcaatacgagcacgcacgaagatttc
gaagaaaccttctatagcataaagcagcaagaagcgattttgtccgaacgggagcgaagc
cacaaattacggatgcagcgatggaaaaacatgaagcggctgctgccttccccgtacttc
gggcgcttcgactttcaagaagacggcttgagcttgagcgagcaaatttacatcggcgta
tcgtccttcgtcggcgaagacggcctgagcttcctagtgtatgactggcgtacgccgata
gcaagtctgtactacgattattccccgggagaggccgcttatgaaacgccgggcggacaa
atcgcgggtacgatgaagctgaagcggcaataccagatccgagacggtcagctccggaat
gtgttcgatacgagcataacgatcggcgacgaattgcttcagcaggtgcttggcaagggc
gcggatgcgcagatgaagagcatcgtggcgactatccagaaggagcaaaacgccatcatc
cgcaacgacaagagccgcatgctcattgtgcagggcgcggccggaagcggaaagacgtcc
gcggctcttcagcgcgtagcgtacttgttgtacaaacaccgcgataggctcagggcggat
cagatcgttctattttcccctaatccgatgtttaacagttatgtatcgacggtccttccc
gagctcggcgaggagaacatgcagcagacgacctttcaggaataccttgcgtattggcta
ggatccgcgtttcgtctagaagacccgttcgagcagatcgaatatgtgctgacggcggga
tcgacgcaagattatgaagcgcgactgagcggaattcaatataaggcgtcggaagcttat
ctgttagctctccaaagctatgcgtcgtggctggggaaggaaggcatgctattccgcgcg
atccgtttccgagatcgcgagttaattacggcggagcaaatgaagtcgcaattttacggc
tatgacagtaacgtccgcttggctaaccgcgtcattctgctgcgggaatggctgcttcaa
gagctgacctcgctggagcgtaaggaacgggaggcgctttgggttcaagacgaactcgat
tacctcgataacgagcaatatgcggaagcttacggcgagctgctcaagaaggttcaacgg
gaagacgcagtcttcgattttacttcggaatacgtggaagcttatggagattttcgcggg
aaggagcagggcgaagagaatgtcttcgactttgccggccaggaagaagagttgctgcgc
cgtatgatcgtgaaggagagcttcaagccgctgaggaaggacgtgaagcgattcgagttc
atagatacgatcgggctgtacgatcaattgttcgatgaggatgcgacttttcgtcaaatg
ccgaacgaatccgaggtgccggaacgttggtcggaaatctgtaagcaaacgaaagaaaag
ctgggtaaactcgaattattctatgaggatgcgaccccgttcctgtacctgaaggaactc
atcgaaggcattcggacgaacacggaggtgcggcatctcttcgtcgacgaaggccaggat
tattcgccgttccaatacgcgtttctcaaacggctgtttcctcgagcccgcatgacggtg
ctcggagatttcggccaagcgatcttcccccaagcaacgaatttgcacgaggcggattcg
cctttgatccggctatacggagaagacgaaacgaacctgattcgcctcgtccgaagttac
cgttcgactcgcgagattgtggagtttacgaggtcgctgctgccgggcgaacatattgtg
cccttcgataggggcggaaggaagccgtacctctcgaaggttggcagcggcgaagagcgg
acggcgcgaataatcaaggatcttgcggcgctggaagccgaaggtttcgactccatcgcc
atcattacgaaaaccgcagccgaaagccgcgaggcttatgaagcattaacgtcgcaaggg
tgcgagggactgcggctcattacgaaagaaacgattaccttcgagaagggggcggcggtg
atgcctgcctatctcgccaagggcgtcgagttcgacgccgtgctgatctacgatgcttct
tctcaagcctacaaccgggaaagcgaacgcaagctcttctacaccgcatgcacgcgagcg
atgcatcgtcttctgctgtatgcgacaggagaatggacgccttatatccgggcgttggat
acaactttgtttgaagtagagcaataa
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integrated database retrieval system
