Cohnella herbarum: HH215_23165
Help
Entry
HH215_23165 CDS
T08421
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cheb03032
]
HH215_23165 (gyrA)
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_23165 (gyrA)
Enzymes [BR:
cheb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HH215_23165 (gyrA)
DNA replication proteins [BR:
cheb03032
]
Prokaryotic type
DNA Topoisomerases
HH215_23165 (gyrA)
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HH215_23165 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QJD85798
UniProt:
A0A7Z2VMG8
LinkDB
All DBs
Position
5436095..5438572
Genome browser
AA seq
825 aa
AA seq
DB search
MSEEQRSQVRDRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDSPIYEAMVRMAQDFSLRYMLVDGHGNFGSVDGDFAAA
MRYTEARLSKIAMEMLRDINKETIDYRPNYDGEEIEPVVLPARYPNLLVNGNTGIAVGMA
TNIPPHNLREVIEGTQALLRDPELTPYDLMEFVKGPDFPTAGLILGRVGIRQAYATGRGS
VTMRARATIEENNGKARILVHEIPYQVNKARLVEKIAELVREKKIDGITDLRDESDRNGM
RIVIELRRDVTPTVVLNNLYKQTQMQTSFGVNMLALVNNEPKVLNLKDVLHHYIKHQVEV
IRRRTEYDLKKAEARAHILEGLRIALDHLDEVIALIRASRTAEEAREGLITRFGLSADQA
QAILDMRLQRLTGLEREKIEQEYNELQAKIAEYKAILADESLVNEIIHDELEEIKLKYGD
ERRTEITVSDDEILDEDLIPRDDVVVTMTHTGYIKRLPVSTYRSQKRGGRGIMGMGTKDD
DFIENLFVSNTHHYLLFFTNKGRVFRMKAYEIPDLSRTARGTPIINLIQIEQGETINAVI
PVESFEPNQFLFFATRNGIVKKTPLDDYSNIRKVGLIAISLREDDDLIGVKLTDGEREIV
MGTSQGMSIRFSEQDVRAMGRSATGVKGIQLDEDDKVIDMDIVQPDKEVLIVTAKGYGKR
TPMTEYRIQTRGGKGIKTLNVTEKNGVIVGLKVVQDDEDLMIMTSSGTLIRTSMSGINTM
GRITQGVKLINIRDEDSVATVARAPRSEDSDTDSEEVEGDSEDNA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaacaacgctcccaagtccgtgaccgcgatataggggtcgagatgcgggaa
tcgttcatggattacgctatgagtattatcgtcagccgggctttgccggatgttcgcgat
ggcttgaagcccgttcatagacgtattctctatgcgatgtctgaattgggaatgtccccg
gacaagccttacaagaaatcggcaagaatcgtcggagaagtcatcggtaagtatcatccg
catggcgactctccgatctatgaagccatggtacggatggcgcaagacttctcgctccgt
tacatgttggtcgacggtcatgggaacttcggttccgtagacggcgactttgccgcagct
atgcggtatacggaagctcgtctttccaagatcgccatggaaatgcttcgggacatcaac
aaggaaaccatcgattacagaccgaactacgacggcgaggaaatcgagcccgtcgtactg
ccagcaagatatccgaacttgctcgttaacggaaatacgggtatcgcggtcgggatggcg
acgaatattccgccccacaatctgcgcgaggtcatcgaaggaacgcaagcgttattgcgc
gatccggaattaactccgtatgacttgatggaattcgtaaagggaccggatttccctacg
gcgggtcttatccttggccgggtcggcatccgtcaagcttacgcgacgggacgcggatcg
gttacgatgcgcgcaagggcaacgatcgaagagaacaacggcaaagcccgcattctcgtt
cacgagatcccttaccaagtcaataaagcgaggctcgtggagaagatcgccgagctcgtg
cgcgagaagaagatcgacggaattaccgatcttcgcgacgaatccgaccgtaacggaatg
cgcatcgtcatcgaattgcgtcgcgacgtaacacctactgtcgtattgaacaacttgtac
aagcaaacccagatgcagacaagcttcggggttaacatgctcgcgctcgttaacaacgag
ccgaaggtacttaacttaaaagacgtgcttcatcactacatcaagcatcaagtcgaagtt
atacgtcgccgtacggaatacgatctgaaaaaggcggaagcgcgcgcgcacattctggaa
ggattgcgtatcgccctggatcatctggatgaggttatcgcgcttattcgcgcttcccgc
acggcggaagaagcacgcgaaggcttgattacgcgattcggactttcggcagatcaagca
caagcgattctcgatatgcgtctgcaacgccttacgggcttggaacgcgagaagatcgag
caagaatataacgagttgcaggcgaagatcgcggaatataaagcgattctcgcggacgag
agcctcgtaaacgagatcatccacgatgagctcgaagagattaagctcaaatatggagac
gagcgccgtaccgaaattacggtaagcgacgatgaaatattggatgaagatctcattccg
cgcgatgacgttgtcgtaacgatgacgcataccggctatattaagcggcttcccgtttcc
acctatcgcagccagaaacgcggcggtagagggattatgggaatggggaccaaggacgac
gatttcatcgaaaatctattcgtctccaatacgcatcattacctgctgttctttacgaac
aaaggtcgcgtattccgaatgaaagcctatgagattccggatctgagccggacggctcgc
ggtacgccgatcatcaacctgatccagatcgagcaaggcgagacgatcaatgcggttatc
ccggttgaatcgttcgagccgaaccagttcctcttcttcgcaacccgcaacggtatcgtg
aagaagacgcctctcgacgattactcgaacatccgtaaggtcggtttaatcgcgatttcc
ttgcgcgaagacgacgatttgatcggcgtgaagctgacggatggcgaacgcgagatcgtc
atgggtacgagccaagggatgtccattcgtttctccgagcaggatgtaagagcaatgggt
cgttcggcaaccggcgttaaagggatccaactggacgaagacgacaaagtaatcgatatg
gacatcgtgcagccggataaagaagttctgatcgtaacggctaaaggatacggcaaacgg
actccgatgacggaatatcgcattcaaacccgcggcggtaaagggattaaaaccttgaac
gtgacggagaagaatggggtcatcgtaggcttgaaagtcgttcaagacgatgaagacttg
atgatcatgacgtcctcgggaacattgatccgtacgagcatgtccgggattaatacgatg
ggccggataacccaaggcgttaaattgattaatatccgcgatgaagattccgtggccacg
gtagctagggctccgcgaagcgaggattcggatacggattctgaagaagttgagggcgat
tcggaagacaacgcatag
DBGET
integrated database retrieval system
