Cohnella herbarum: HH215_25050
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Entry
HH215_25050 CDS
T08421
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
cheb
Cohnella herbarum
Pathway
cheb00450
Selenocompound metabolism
cheb00970
Aminoacyl-tRNA biosynthesis
cheb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HH215_25050
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HH215_25050
Enzymes [BR:
cheb01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
HH215_25050
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Motif
Pfam:
SelA
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QJD86121
UniProt:
A0A7Z2ZN81
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Position
complement(5872681..5873784)
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AA seq
367 aa
AA seq
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MANSLNARYGLKRVINASGRMSILGVSAPTDTVMDAMKHGGQNYVEIADLVDKSGDYIAR
ILGSEAAVVVNSASSGIALSVAAIVTQGNRRKSVRLHQEAIAKNEIIILKGHNVQYGAPV
ETMVFLGGGKLLEVGYANEGKAEHIEDAISEHTAAILYVKSHHAVQKNMISVEEAWEIAQ
RNGIPLIVDAAAEEDIQKYVKCSDLAIYSGSKAIEGPTSGIVGGKRTYIEWVKVQLHGIG
RSMKVGKETTFGLLQALDEYIVKADKSEQEKEALQALMPLNDIDGIRVSIVQDEAGRAIF
RARIQIDPAKSGTSAKQVVTELQNGEIAIYTRDYGVKQGYFDIDPRPLLGDDMQVIASRI
HELAGGK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcattgaatgcgagatacggacttaaacgcgtaattaacgcaagcggacga
atgagtatattaggcgtatccgctcctacggataccgtcatggacgccatgaaacacggt
gggcaaaactacgtggagatcgcggatttagtggataagtccggcgactatatcgcgcgc
attctgggttccgaggcagccgtcgtcgtgaattccgcttccagcggcatcgcgctctcg
gtagccgcgatcgtgacgcaaggaaaccggcgcaagagcgttcgcctgcatcaagaagct
atcgccaagaacgagatcattattctgaaaggccataacgtgcaatatggagcacccgta
gaaacgatggtattcttagggggcggcaagctcctcgaagtgggctatgcgaatgaggga
aaagcggagcatatcgaagatgcgatctcagaacatacggcagccattctatacgtcaag
tcgcatcacgcggtacagaaaaacatgatttccgtagaggaagcatgggagattgcccaa
cgcaacggcattccgcttatcgtggacgcagccgccgaagaagacattcagaagtacgtc
aaatgctccgacttagctatctacagcggatccaaggcgatcgaaggcccgacatcgggc
atcgtaggcggcaaaagaacgtacatcgagtgggttaaggtacaattgcacggcatcgga
cgcagcatgaaagtcggcaaagaaacgacgttcggactcctacaagcgctcgacgagtat
atcgtcaaggcggacaagagcgaacaagaaaaagaagcgttgcaagcgttgatgcctttg
aacgatatagatggaatacgggtaagcatcgttcaggacgaagccggccgcgcaatcttc
cgggcgcggattcagatcgatccggcgaagtccggcacgtccgccaaacaagtcgtcacg
gagctgcaaaacggagaaattgcgatctacacccgtgactacggcgtcaagcaaggttat
ttcgacatcgaccctcgtccgctgttgggcgacgacatgcaagttatcgcatcaagaata
catgaattagcaggaggaaaataa
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