Cohnella herbarum: HH215_26045
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Entry
HH215_26045 CDS
T08421
Name
(GenBank) AraC family transcriptional regulator
KO
K02016
iron complex transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_26045
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron complex transporter
HH215_26045
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
QJD86288
UniProt:
A0A7Z2ZNK0
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All DBs
Position
6096766..6098661
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AA seq
631 aa
AA seq
DB search
MDWEAHIERWSRTAVRLLDIRQYRVENGTLPDRYLAHTSFFVVTTQGEAKVSLSGKDYQT
RSLHILHGGKGAELGFMPLGNDFACYLILYNAECALPEDRESFRMSYEFIPYAVLPLKEQ
CQAMDRLWQQSTPLDKLQAQSAFLPFVHEVMRQIRTSATESGKHNLVTEAIHYIHENYRK
PITAEELAGIYGCSASYLSRLFKSHLGLGPIEYLIHVRVHKSKQFLLRSEARVQEIASSV
GYSDVYYFSRLFKKHTGCSPLQFREDNRQTVQHNPSRPLKSSIVSQKHVLHNDNDNYYHL
IREGDTSMFRFSRPAFGAMMLLCTTLLLNACQSNGNTGTPASQPASVEAATDSTAGETRI
YEHLKGQTEIPVKPRRVVSLFHLGELIALGVKPVGSTTFILKNPLLSDTSDIADVGVPPN
AEKIMSLEPDLIVTTAPFAEAFEGGYEALSKIAPTIVVEQYNDPIKDVEMFGDILGKQEE
ARKWNETFATKIAEYKEKISPFIGADETFSILNVRPGAYYIYGDTNMGGNILYKYLGLKP
TDKVETDVIKGETWEISAEVIPDFIGDRLFLAVNEGAEKELKEAEKLIQNSPAGKTGRIY
NIDFNQFLPSDPISVEQQLDIIVSLMVDSNK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggattgggaagcccacatcgaacggtggagccgaaccgccgttcgattgctggatatt
cgacagtatcgcgtggagaacggaactttacctgatcgctatttggcgcatacgagcttt
ttcgtagttacgacccagggagaggcgaaggtgagtctgtcggggaaggactatcaaacc
cgttccctccacattctacacggaggaaagggtgcggagctaggctttatgccgctggga
aacgactttgcctgctatttgattctgtataacgcagaatgcgccttgccggaggatcgg
gagagcttccgtatgtcttatgaatttattccttatgcggttttgcctctgaaggaacag
tgtcaagcgatggatcgcctgtggcagcaatcaactccattggacaagttgcaggcgcag
tccgcctttcttccgttcgtacatgaagtcatgcgacaaatccgcacatcggcaacggaa
agcggcaaacataatttggtaaccgaagcgattcactatattcatgagaattacaggaag
ccgattacggccgaggaattggccgggatttacggctgcagcgcgagctacttgtctcgc
ttgttcaaaagccatttaggactaggtccgattgaatacttgattcatgtacgcgttcat
aaatcgaagcagttcctgctgagatcggaggctcgtgtccaggaaatagcgagcagcgtt
ggctactcggatgtctattatttcagtcgcttgttcaagaagcataccggttgctctccg
cttcaattccgggaggacaataggcagactgttcagcataatccatcacgtccgttaaaa
tcgtccattgtatctcaaaagcatgttctccataatgataatgataattattatcatttg
attagagaaggggatacatcgatgttcagattttcaagaccggcgttcggagcaatgatg
ctattatgcacaactttgcttctgaatgcatgtcagtcgaacggcaatacagggacgcct
gcctcccaacctgcttcagtagaagccgctacggacagcacggctggagaaacgcggatt
tacgagcatttgaaaggccaaacggaaattcccgtgaagcctcggcgcgtggtcagcctc
ttccatctgggcgaactgatagcgcttggagtaaagccggtaggctcgactaccttcatt
ctgaaaaatccgctcctaagcgatacttccgatattgcggatgtcggagttccgcctaac
gcggaaaagattatgtcgctggagcctgatctgattgtaacaacggcaccgtttgcagag
gcattcgagggcgggtacgaagcattgagcaaaatcgcgccaacgattgtagtggagcag
tacaacgatccgattaaggatgttgaaatgttcggcgatattctcggtaagcaagaggaa
gcgcggaaatggaatgagacattcgcgacaaaaatagcggaatacaaggagaagattagc
ccgttcattggtgccgatgaaaccttctcgattttgaacgtgcgtcccggtgcgtattat
atttacggcgataccaatatgggaggcaacattctctacaagtatctaggtttgaagccg
acggataaagtagagactgacgtcattaagggagaaacatgggaaatatccgccgaggta
atccccgatttcataggcgatcggttatttctggccgtgaatgaaggggcagagaaagaa
ttgaaggaagcggagaagcttattcaaaattcgccggcagggaagaccggaaggatctac
aatatcgatttcaatcaatttcttcccagcgatccgatttcagtagaacaacagttggat
atcatcgtcagtttaatggttgatagcaataaataa
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