Cohnella herbarum: HH215_26540
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Entry
HH215_26540 CDS
T08421
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HH215_26540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_26540
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HH215_26540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NARF
Peptidase_C13
Motif
Other DBs
NCBI-ProteinID:
QJD86372
UniProt:
A0A7Z2VNS6
LinkDB
All DBs
Position
6245175..6246791
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AA seq
538 aa
AA seq
DB search
MKLKKINVLVTALILSIALVACTKDNSNNKGTEASGTASPSAGASASSPAEQKEYKNELH
IALTAQPPTLDSAVTVSSVALDTAGNIFEQLYTLNAAYEPVPVLAESVETSADGLTYTFK
LRQGVKFHNGKEMTSEDVVASMNRWLVTSSRAKVLLTNAKFEAVDTYSVKLTIEKPASDV
LILIASQAQFPSIMPKEIVESAPAEGVTEYIGTGPYKFQEWKQDQYIHLVRNNDYQSSQE
TASGFYGKKEAPTENLFFHFVTDHATRIAGVKTGEYDIADAIPIENYDELAADKNLELLS
FPGGALTAFLNTSEGLLADVKYRQAILAALNNEEIMLASFAKPELYSLAPGYLGANQVQW
ATDAGKEYYNQADPEKAKQLLKEAGYKGEEITLLTTKDYAEMYAATLVIQEQLRQVGFNV
KVDNYDFPTFLETKNDRSKWDLFVASTGYQLTPPQLLAVNPDWAGLNDDKVKAALAAIRG
AATPEDAKKEWETLQGYLYEIGSSTVIGHYNGIVAVNKAVENFELFEAPIVWNAKIAK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaagaagattaacgtactcgtaaccgcattgatattatcgatcgcactcgtt
gcgtgcaccaaggataattcgaacaataagggaacggaagctagcgggacggcgagcccg
agtgccggagcaagcgctagttcgcccgcggagcagaaagaatataagaacgaattgcat
atcgcgcttacggctcaaccgccgacattggattccgcggtaaccgtgtcgtccgtcgcg
ttggatacggcaggcaatattttcgaacaactctacacgctgaatgccgcttacgagccg
gtacccgtgctagcggaatcggtggaaacgagcgctgacggattaacgtatacgttcaag
cttcgtcaaggcgtcaagttccataacggcaaagagatgacgtccgaagacgtcgtggca
tcgatgaaccgctggttggtaacatcctcccgcgcgaaggtgctgctgacgaacgcgaag
ttcgaagccgtggatacctactccgtgaagctgacgatagagaagccggcttccgacgtc
ttgattctcatcgcttcccaagctcagttcccttcgattatgccgaaggagatcgtcgag
tccgcaccggcggaaggggttaccgagtatatcggaacgggcccgtacaagttccaagaa
tggaagcaagatcagtacattcacttggtaaggaacaacgattaccaatcttcgcaagag
acggcaagcgggttctacggtaagaaagaggcgcctacggaaaacctgttcttccatttc
gtaacggatcacgcaacgcggatcgcaggcgtgaaaaccggagagtacgatattgccgat
gccattccaatcgagaactacgacgagcttgcggccgacaagaacctcgaattgctttcc
ttcccgggaggcgcgttaaccgcattcttgaacacgagcgaaggtttgttggcggacgtc
aaataccgtcaagccatactggcggcgctgaacaacgaagagatcatgttagctagcttc
gcgaagccggagctttactccttggcgccgggatatttgggagcgaaccaagtgcaatgg
gcgacggatgccggcaaggaatattacaatcaagcggatccggagaaagcgaagcagttg
ttgaaagaagccggatataaaggcgaagaaatcacgttgcttacgacgaaggattatgcg
gagatgtacgccgcgacattggttatccaagagcagcttcgtcaagtcggatttaacgtg
aaggtcgataactacgatttccctactttcttggaaacgaagaacgatcgcagcaaatgg
gatttgttcgtggcgagcacgggatatcagttaactccgccgcaactgttggccgtgaac
ccggattgggcgggattgaacgacgacaaagtcaaagcggcgctggctgcgatccgcgga
gctgcgactccggaagacgcgaagaaggaatgggaaactctgcaaggctacttgtatgag
atcggctcctccaccgttattggacattacaacggcatcgtagccgtgaacaaagcggtc
gaaaacttcgagttgttcgaagcgccgatcgtgtggaacgccaaaatcgcaaaataa
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