Cohnella herbarum: HH215_27195
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Entry
HH215_27195 CDS
T08421
Name
(GenBank) HAMP domain-containing protein
Organism
cheb
Cohnella herbarum
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Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
Cache_3-Cache_2
HAMP
dCache_1
T7SS_ESX_EspC
YkyA
Motif
Other DBs
NCBI-ProteinID:
QJD86487
UniProt:
A0A7Z2VNR1
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Position
6405441..6407204
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AA seq
587 aa
AA seq
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MEKTKAKGMFKLTIKRKLLFVTSLLLIVPILILGGVTYQVASKETSSLIETGLKNNVRMA
EEMLESLDKAVRNGTMTREDAEENFRVFLLGEKQADNTRPINKKIDLGESGYFYVLDEKG
TLLAHPLLEGENIWDKQTADGTYYIRDVIKSAQNGGGFTYYDWPLPESSKEARKIVYAEN
ANSWGWVITAGSYLQDYNSGQQGILNSMIITLGACMVIGLTVLTLFALHISRPVVRVSRM
AERMAEGDLTGDSIVVTGKDEVGQLTSSFNRLLHNLRELAGNQLLSANVLAASSSSLSSV
IVDSVRAAQQTSDSLSELAVNHEVQAGSIEETSKAMEEMTAGIGRIAFSATTTFESSAAM
LQEAEEGNQLIIRSSEQMATISSTVGNMSTVVAHLGQRSQQIGDIASTIRDISGQTNLLA
LNASIEAARAGEHGKGFSVVASEIRKLAERSNESANQVTELIETILKDIAAADESMRNGE
LEVTAGTASIGRSGEAFTRILESTRNVVIQAEEVSAVAEQMSASAQQVAASLQQMESVSS
NSALASTTISASTEEHLASMEEISSSAKQLNEMSDKMKQLANRFKIG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacgaaggcgaagggcatgttcaaacttacgattaaaaggaaacttctattc
gtaacttccttattgttgatcgttccaattttaatactgggcggggttacctatcaggtt
gcgtcgaaagagacgagctcgttaatcgagaccggattaaagaacaacgtcagaatggca
gaagaaatgctggaatctttagataaagcggtgcgcaacgggaccatgacgagagaggat
gcggaagaaaactttcgggttttcctgctcggggaaaaacaagcggataacacgagaccg
attaataagaagatcgacttgggcgagagcggatatttctatgttctagacgagaaaggg
actttattagcccatcccttgctagaaggcgagaacatctgggacaagcagaccgcggat
ggcacttattatataagagacgtcattaagtccgcccagaacggcgggggctttacttat
tacgattggccgttgcccgaatcctcgaaggaggctcgtaaaatcgtatatgcggaaaat
gccaattcctggggttgggtgattacggcgggttcttatttgcaagactacaacagcgga
caacaagggattttgaactcgatgatcattacgctgggagcctgcatggtcataggcctc
accgtgctaaccctgtttgcattacacatttctagacctgtcgtacgggtatcgcgaatg
gcggagagaatggcggaaggcgacctgacgggagatagtatcgttgtcaccggtaaggac
gaggtcggacagctaacctcctccttcaatcgattgcttcataatcttcgggaattggcg
ggcaatcaactgctcagcgcgaatgtgttggccgcatcctcaagcagcctttccagcgtc
atcgtggattccgttcgggcagcacaacagacatcggactcgctgtcggagttagcggtt
aatcatgaggtacaagccggcagcatcgaggaaacgtcgaaagcgatggaagagatgacg
gccggtatcggtcggatcgcattctcggcaacgacgacgttcgaatcctcggcggcgatg
ctgcaagaagcggaggaagggaaccaattgattatccgatcctcggagcagatggcgacc
atcagctctactgtaggcaatatgagcacggttgtcgcgcatttaggtcagcgttcccaa
cagatcggggatatcgcgagcacgataagggatatatcggggcagacgaacttgttggct
cttaacgcttctattgaagccgctagggcgggagagcacggcaaagggttttccgtcgta
gcgagcgaaattcgcaagcttgcggaacgttccaacgaatccgctaaccaggttacggaa
ttgatcgaaacgatacttaaagacattgcggcggcagatgaatccatgcgaaacggagag
ctggaagtgacggccggaacggcttccatcggccgatcgggcgaagccttcacccgcatt
ctcgaatcgacccgcaacgtggtcatccaagccgaagaagtatccgcggtagccgagcag
atgtccgcaagcgctcaacaagtagcggcttccttgcagcagatggagagcgtctcctcg
aattccgcgctggcttccactacgatatccgcctctaccgaggagcatttagcctccatg
gaggagatctcgtcttctgctaagcagctcaacgaaatgtcggacaagatgaaacaattg
gcaaaccgatttaagatcggataa
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