Cohnella herbarum: HH215_27265
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Entry
HH215_27265 CDS
T08421
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HH215_27265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_27265
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HH215_27265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QJD86500
UniProt:
A0A7Z2VP43
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All DBs
Position
6421104..6422735
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AA seq
543 aa
AA seq
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MRTRKNKSLYGIILMAILTLVVSACSNNGNSSPSPSASNTTPSASQPAESGQAKDGGSLI
FAVASDPIVLNPNYAGDRVSLTIDQALFAPLFQVNNGQKTFYLADSLSLSEDGLTYTLKL
KEGLTWHDGEKLTADDVVFTLEKILDESQNSFLRANFVIGGKPVQATKVDDTTVEFKLPQ
VSPAFEAALVQVFPIPKHIFENETNIEKSEKNKAPIGSGPFKFKEYKTGEYLTLERFDNY
FGGKPHLDSVTYRVAKDTNAANLALQNGEINLKYLDPQDVATIQATNNFEILPYSEGRLG
YMMFNQKSDTGVLNKKEVRQAIAYALNREELIQVAYTSLDYADPAKSFLTPDVLYQTNDV
PTFDNDVAKAKELLQTAGVSNLKLRFIVQTGNKAQEAISLYVQQKLKDIGVTVELQSMDS
SAWVAKFLDQKATDYELAVTGYIMSFDPDSYSILFSSDGSSNYSHYDNKQVDELFKQGAG
EGDATKREGIYKQIQEIVADDAAIYPIAYTKTIVALDKRYGGTEEAVLKPVVVFEDLSKI
YLK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccgtaaaaacaaaagcttgtacggaattattctcatggcaatattgaccttg
gtcgtaagcgcctgctccaataacgggaattcttccccttcgccgagcgcttcgaataca
accccgtccgcttcgcaacccgccgagagcggccaagcgaaagacggcggaagcctgatc
ttcgcggtcgcttccgacccgatcgtgcttaacccgaactacgcgggcgaccgcgtcagc
ctgacgatcgaccaagcgctgttcgcgcctttgttccaagtgaacaacggacagaagacg
ttctacctggccgatagcctgtcgctatccgaagacggtctgacgtacacgctgaaattg
aaggaaggcttgacttggcatgacggagagaagctgacggccgacgacgtcgtgttcacg
ctcgagaagattttggacgaatcgcagaatagcttccttcgcgccaatttcgtgatcggc
ggcaagccggtccaagcgacgaaagtcgacgatacgacggtggaattcaagcttccgcaa
gtgagcccggcgttcgaagcggctctcgtgcaagtgttcccgattccgaagcatattttc
gagaacgagacgaatatcgagaagagcgagaagaacaaagcgccgatcggttccggaccg
ttcaaattcaaagaatataagacgggcgagtacttgacgctcgagagattcgataactac
ttcggcggcaagccgcacctcgattcggtcacttatcgcgtcgcgaaggatactaatgcg
gccaacctggcgctgcagaacggcgagatcaacctgaagtatctcgacccgcaagacgtg
gcgacgatccaagcgacgaacaatttcgagattcttccttatagcgaaggtcgcctcggt
tacatgatgtttaatcagaagagcgacacgggcgtgctgaacaagaaggaagtccgccaa
gcgatcgcttacgcgctgaaccgcgaagagttgattcaagtggcttacacgtcgctcgat
tacgccgatccggccaagtcgttcttgactccggacgttctataccagacgaacgacgtt
ccgactttcgacaacgacgtcgcgaaagcgaaagagctgcttcaaacggccggcgtcagc
aacttgaagcttcgcttcatcgtacaaaccggtaacaaggcgcaagaagcgatctcgctt
tacgtgcagcagaagttgaaagacatcggcgtgacggtcgagctgcaaagcatggattcg
tccgcgtgggtggctaaattcctcgaccagaaggcgacggattacgaactggcggttacg
ggctacatcatgagcttcgatccggattcgtacagcatcctgttctcttccgacggttct
tccaactactcgcattacgataacaaacaagtcgacgagctcttcaaacaaggagccgga
gaaggcgatgcgaccaaacgcgaaggcatctataagcaaattcaagaaatcgtcgcggac
gacgcggctatctacccgattgcttacacgaagacgatcgtggctcttgacaagcgttac
ggcggcaccgaagaagccgtcctgaagccggtcgtcgtattcgaagatttgtccaagatt
tacctgaaataa
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