Cohnella herbarum: HH215_31270
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Entry
HH215_31270 CDS
T08421
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HH215_31270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cheb03400
]
HH215_31270
DNA repair and recombination proteins [BR:
cheb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HH215_31270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Zn_ribbon_3
DZR
Motif
Other DBs
NCBI-ProteinID:
QJD87218
UniProt:
A0A7Z2ZPC2
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All DBs
Position
complement(7455439..7456329)
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AA seq
296 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFTATEDKDIHLRMIHKECGTPISNVRTCPHCEKEVQWDEI
SKGYEYEKGRFVLFDSDELDAIKPENTRTIQILDFVDLTEIDPLYYQKAYYLSPDQAGSG
AYNLLLEAMRQSGKIGIAKIAIRSKSSLAAIRAVDNCICMETMHYPDEIRSLQLVPNLPE
QTTVNERELTMAKMLIEQLSTPFDPNKYTDDYRISLQEAIQRKISGEGPDIVTAPAAEKT
NVIDLMAALQASLEAVKPASTPLPDSAVDPSADPSGDRNKAKPRGTRGRKKEGAVP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtgtggaaaggcgccatcagcttcggattggtacacgtccccgtcaaaatg
ttcaccgctaccgaagacaaggacatccacttgcgaatgatccataaggagtgcggcacg
ccaatctcgaacgttcgaacttgccctcattgcgagaaggaagtccaatgggatgaaatc
tcgaaagggtacgagtatgagaagggcaggttcgtcttattcgattccgatgaactcgat
gccatcaagccggaaaatacgagaacgattcaaatcctggatttcgtcgatttgacggaa
atcgacccgctgtattaccagaaggcttattatttatctccggatcaagccgggtcgggg
gcatacaatctgttgctggaagcgatgcgccaatccggcaaaatcggcattgccaaaatt
gcgatccgcagcaaaagcagcctcgcggccattcgagccgtcgacaattgcatctgcatg
gaaacgatgcattatccggatgaaatccgttcgttgcagctagtgccgaatttacccgaa
cagacgacggtgaacgaacgggagcttactatggcgaaaatgctaatcgaacagctatcg
acgccattcgatccgaacaagtataccgacgattaccgaatcagccttcaggaagctatt
cagcgtaaaatatccggagagggccccgacatcgttaccgctcccgccgcggaaaaaacg
aacgttatcgatctcatggccgcgcttcaagcaagcttagaggcggttaagccagcctcg
acgccattaccggattcggcagtcgatccatctgccgatccatccggcgaccgtaacaaa
gcaaaaccgcgaggaacccgcggccgcaaaaaagaaggagccgttccctga
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