KEGG   Cohnella herbarum: HH215_33740
Entry
HH215_33740       CDS       T08421                                 
Name
(GenBank) AAA family ATPase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cheb  Cohnella herbarum
Pathway
cheb03420  Nucleotide excision repair
cheb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cheb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HH215_33740
   03430 Mismatch repair
    HH215_33740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cheb03400]
    HH215_33740
Enzymes [BR:cheb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HH215_33740
DNA repair and recombination proteins [BR:cheb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HH215_33740
   MMR (mismatch excision repair)
    Other MMR factors
     HH215_33740
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 SLFN-g3_helicase Catalase_C nSTAND3 NACHT DEAD ResIII AAA_16
Other DBs
NCBI-ProteinID: QJD87661
UniProt: A0A7Z2VR54
LinkDB
Position
8026999..8029356
AA seq 785 aa
MVNEPNSPRDEEEKRLLVVLEQVSRRMRKELALLGDRREDVVGIRQEFWDDVRMNFSDST
EVGETWSSIVQQAELLAERERSHRVASEAVERLTKQFDSPYFARIDFAEKGYDAEVIYIG
RASLVGEDGETFYVYDWRAPVSSLFYDHEPGPATYRVPDGEMIGELLLKRQFVIRGGQMK
FMFDTSETVGDEILQAVLSEGSDTSMKSIVATIQKEQNGIIRDEKHKLLVVQGAAGSGKT
SAALQRIAYLLYRYRESLAPDQIILFSPNPVFKGYISRVLPDLGEANMRQMTFRELIEAR
LGRRFEVEDLFSQTEALAADDGSPAGESRERSVRYKGSEHFFVTVENYLKRLEQEGVRFH
PLRFRSMTIASAEEMSERFYGIQASDGFGTRAAGVRRWLLERLQSWVDSQMDEAWVEEAA
ESASSEDIQRAYVEVRRSGGFHDEAFEDEDHMSAIIRRRVAENAVAPLVKAVRNYRFLDA
VATYRELFESRSLFAACAPDGKLPLGWEWMLQRAEETFGRKLVDHEDATPLMYVSEALEG
FRRVEGDILHVFVDEAQDYSPFQAAYLRRRYPRARMTVLGDFNQAIYLQSQDSGGFGGWI
RLMSPEVTSVLRLTTSYRSTEQIVDFTKAILTAEDAKGITPFNRKGEPPKVVACKDGGQL
GEKIAADIEDLLGKGYGTIGVITKTAHETGNASAVLKELLPNDVSIALVTGGSAELPRGV
SVLPSYLAKGIEFDAVLVWDASDDLYGKDKDRKLLYTVCTRALHVLHVYHTGEASPWLPR
QGGRK
NT seq 2358 nt   +upstreamnt  +downstreamnt
gtggtaaacgagccgaattcgcctcgcgacgaggaagagaagcggttgttggtcgtgctg
gagcaggtgagcaggcggatgcgcaaggagctggcgctgctcggagaccggcgcgaagac
gttgtcggaatacgccaagagttctgggacgacgtaagaatgaacttctccgattcgacc
gaagtcggcgagacttggagcagtatcgttcagcaagccgaactgctagcggaacgggaa
cgtagccatagggtagcttcggaagccgtcgaacggttgacgaagcagttcgattcgccg
tatttcgcgcgaatcgattttgctgagaagggttacgatgccgaagtcatctatatcggg
cgcgcgtctctcgtaggggaagacggggagactttctacgtttacgattggcgtgcgccc
gtgtccagtttattttacgatcatgagccaggtcccgctacttaccgggttccggatggg
gaaatgatcggagaattgctgctcaagcgacagttcgtcattcgcggcggtcagatgaag
ttcatgttcgacacgtccgagacggtcggagacgaaattttgcaggccgtactgtcggaa
ggctcggatacgtcgatgaagagcatcgttgccaccattcagaaggagcaaaacgggatt
attagggacgagaagcacaaattgcttgtcgttcagggtgccgcaggcagcggaaagacg
tccgcggctttgcagagaatcgcgtatttgctgtatcggtaccgggagtcgcttgctccg
gatcagatcattttattttccccgaatccggtattcaaggggtacatctctcgcgtattg
ccggacttgggtgaagcgaatatgcggcagatgacgttcagggaattgatcgaagcccgg
ttaggtcgcaggttcgaggtggaagatctgttctcgcagacggaagcgttggcggcggac
gatggaagcccggccggtgagagcagggagcgatcggtaagatataagggttcggagcat
tttttcgtcacggtagaaaattatttgaaacggttggagcaagagggcgtccgtttccat
cctctaagatttcgcagcatgacgatcgcgtcggcggaagagatgtccgagcgattttac
ggcattcaagcttccgacggattcggcacccgcgcggcgggcgttcggcggtggttgctt
gaacggctccaatcctgggtggattcccagatggatgaggcttgggtggaggaggcggcc
gaatcggccagctccgaggatatacagcgcgcttacgtcgaggttcgccggagcggcggg
tttcatgacgaggctttcgaagacgaggaccatatgagcgccattattcgaaggcgcgtc
gcggagaatgccgttgctccgctggtgaaagcggttcggaactatcgcttcctggatgcc
gtcgcgacatatcgggaactgttcgagagccgttcgctgtttgcggcgtgcgcccccgac
ggcaagctgccgctcggttgggaatggatgctgcaacgcgcggaggagacgttcgggcgc
aagctcgtcgatcatgaagacgcgactccgctcatgtacgtttcggaagctttggaaggt
tttcggagagtggaaggcgatattcttcacgtgttcgtggacgaagcgcaggattattcc
cctttccaagcggcctatcttcgtaggcgttacccgcgcgctcgaatgaccgtgcttggg
gactttaaccaagcgatctaccttcagtcgcaggatagcggcgggttcggcggatggatt
cggttgatgtcgccggaagttacatccgtgctaagattgacgaccagctatcgatccacg
gaacagatcgtggattttaccaaagccattctgacagccgaagacgccaagggcattact
ccttttaaccgaaagggagaaccgccgaaggttgttgcctgtaaagacggcggacagtta
ggggaaaagatcgcggcggacatcgaagatttgctggggaaaggctatggaacgatcggc
gtcatcacgaagacggcgcacgaaaccggcaacgcgtcggcagttctgaaggagcttctg
ccgaacgacgtttcgattgcgctcgtcacgggcggttccgcggagcttcctagaggcgtg
tcggtgttgccgtcctatttggccaaaggcatcgagttcgacgccgtcctcgtatgggat
gcttcggacgatctttacggcaaggataaggatcggaagctgctttatacggtttgtacc
cgcgcgcttcatgttctgcacgtttatcataccggagaagcttcaccttggcttccgaga
cagggaggccgaaaatga

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