Cohnella herbarum: HH215_35390
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Entry
HH215_35390 CDS
T08421
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
cheb
Cohnella herbarum
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HH215_35390 (ltrA)
Enzymes [BR:
cheb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HH215_35390 (ltrA)
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GFIT
Motif
Pfam:
RVT_1
GIIM
Cas_Csa5
Motif
Other DBs
NCBI-ProteinID:
QJD88536
UniProt:
A0A7Z2ZQH2
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All DBs
Position
unnamed1:complement(70256..71647)
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AA seq
463 aa
AA seq
DB search
MRSREEQRQQNIPQGSSRQRETVKPPGYAGAPSSSSAQIDHTSREGQYDLLERMLEESNL
RDAYKRVKQNGGAPGIDQVTVAELQAHLWERWETVKWELQAGTYRPMPVKRVEIPKPGGG
VRLLGIPTVMDRFIQQALMQVMTPIFDLQFSPNSFGFRPRKRAHDAVKQARTYIQEGCRW
VVDMDLEKFFDRVNHDILMARVARKVSDKRVLKLIRAYLNAGVMVDGMRQETLEGTPQGG
PLSPLLANILLDDLDKELTGRGLKFVRYADDCNIFVGSKRAGERVMESVVRFVEGKLRLK
VNRDKSAVDRPWKRKFLGFSFLTNKSATIRIAPKKVEQLKERVRGITSRTRGISMESRLK
ELNRYLMGWIGYFRLASAKMHCERLDEWIRRRLRMCLWKQWKLPKTRLRNLRALGVPEWA
ARMMANSRRGCWEMSRNINNALNRYYWNDQGLLSLTSRYLEIR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgcgcgaagagcaacgacagcagaatatcccgcaagggagctcgcggcaaaga
gaaacggtgaaaccgccagggtatgccggagcgccgagttcttcgtcggcacaaatcgac
catacttctcgcgaaggacaatacgacttgctggagcggatgctcgaagagagcaatctt
cgagacgcctataagcgtgtgaaacaaaacggaggagcgcctggcatagaccaagtgacg
gtagcagagctacaagcgcacttgtgggaacgctgggaaaccgtaaagtgggaactccaa
gcgggtacgtatagaccgatgccagtcaaacgggtggaaatccccaaacccggaggcggg
gtgcggctgttaggtatcccaaccgtgatggatcgctttattcagcaagccctcatgcaa
gtgatgacgccgatcttcgatctgcaattctcgccgaacagtttcggattccgtccaagg
aaacgagcacatgacgcagtgaaacaggcgcggacctacatccaagaaggatgtcgctgg
gtcgtggacatggacttggagaagttctttgaccgcgtaaatcacgacatcctcatggca
agagtagctaggaaagtttcggacaagcgagtcctgaagcttattcgagcttatctaaac
gcgggagtcatggtcgacgggatgaggcaagagacgctggaaggaacgccgcaaggcgga
ccgctcagcccgctcttagcaaacattctgttagacgatttggacaaagaactgacggga
agaggactgaagtttgtgcgctatgcggacgattgcaacatcttcgtcggaagcaaacgc
gcaggcgagcgcgtgatggaatcggttgtccgttttgtggaggggaagcttagactaaaa
gtgaatcgggacaaaagcgcagtagaccgcccttggaagcgcaaattccttggattcagt
tttctgaccaacaaaagcgcgacaattcgaatcgcaccgaagaaagtggaacaactgaaa
gagcgcgtaagagggataacctcgcgaacgcggggtatctcaatggaaagccggttgaaa
gaactaaaccgctatctgatgggatggattggctacttccgcttggcatccgcgaagatg
cactgcgaacgcctagacgaatggattcggcgtaggttgcggatgtgtctatggaaacaa
tggaagctacccaaaacccgacttcgaaatttacgcgccttaggtgtgcctgaatgggcg
gcaaggatgatggcaaactcccggcgaggatgctgggagatgtcccgaaatataaataac
gcccttaaccgttactattggaacgaccaagggctgttaagtctaacttctcgatatctt
gaaattcgttaa
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