Cohnella herbarum: HH215_35670
Help
Entry
HH215_35670 CDS
T08421
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
cheb
Cohnella herbarum
Pathway
cheb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH215_35670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DEAD
Motif
Other DBs
NCBI-ProteinID:
QJD88585
UniProt:
A0A7Z2VT10
LinkDB
All DBs
Position
unnamed1:complement(115495..117264)
Genome browser
AA seq
589 aa
AA seq
DB search
MRRAETARSNLLLFAVFFIPVVWAALLAAPALSKGLPALLLHLSEAINHPFQIQWVEDTP
RSLLLFTLTYGISVGIYLASPRNYRRREEHGSARWGKAGRINAKYRDKQPEQNKILTQQV
RIGLDGRKHLRNLNVLVVGGSGSGKTRFYAKPNVMQAHTSFVVLDPKGEILRDTGHLLKS
KDYDIKVLDLINPHRSHGYNPFAYLQDDKDVLKLVTNLIRNTTPKGSNTNDPFWERSETA
LLEALVLYLLYEAPPEEQNFPMVMDMIAAAEVREEDETYQSPLDELFERLAMRDPEHLAV
KQYNIFKLAAGKTAKSILIGLGVRLEKFNLHTIAGMSIVDEMELPVMGEKKTAMFAVIPD
NDSSFNFIVGMLYTQLFQCLMYEADYRHGGRLPVHVHFVMDEFANVALPDEFDKLLSTMR
SREISVSIILQNLAQLKALYKDAWESIVGNCDEFLYLGGNEQSTHKYVSELLGKETIDTN
TYGQSKGRNGSYSINYQQSGRELLTPDEVRLLDNRFCLLFIRGEHPVQDDKYDLLKHPHV
SLTTDGNGLPFQHGGAEHALDWQSVFLHEDGDYELLSEEEVESLFIRRE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcgctgaaaccgcaaggagtaatcttttactctttgcggttttttttattccg
gtcgtgtgggcggcgctgcttgccgcccctgctttgtcaaagggattacctgcacttctg
ctgcatctcagcgaagcgattaaccatcccttccagattcaatgggtcgaggatacgccg
cgaagcttgttgctgttcacgctgacttatgggatttcggtcggcatctacttggcgtcc
ccgcgcaactatcggcggcgcgaagagcatggcagcgcacgatggggcaaggccggacgg
ataaatgccaagtatcgcgacaagcaaccggaacaaaacaagattctgacgcagcaggta
cgcatcggcttggatggccgcaagcatctccggaacctgaatgttcttgtcgtcggcggt
tccgggtccggcaaaacaaggttttacgccaagccgaatgttatgcaggcgcatacgtcc
tttgtcgtgcttgatccaaagggcgagattcttcgcgataccggccatttgctcaagtcc
aaagactacgacatcaaggtgctggacctcatcaatccgcaccgttcgcatggctacaat
ccattcgcctatttgcaagacgacaaggatgttctcaagctggttaccaatctgattcgc
aatacgactcctaagggcagcaatacaaacgatcccttttgggagcgttccgagaccgct
ttgctggaagcgctcgtgctgtacctcctgtatgaagcgccgccggaagagcagaacttt
ccgatggtgatggatatgatcgctgctgctgaggtgcgggaagaggacgaaacgtaccaa
agtccacttgatgagctgttcgagcggctggccatgcgcgatccggaacaccttgccgtc
aagcagtacaacattttcaagctggcggcgggcaagacggccaagtccattttgattggc
ctcggcgttcggttggagaagttcaacttgcatacgattgcggggatgagcatagtcgac
gaaatggaattgcccgttatgggggagaagaagacggcgatgtttgccgtcattcccgat
aacgacagcagcttcaacttcattgtcggcatgctctacacacagctttttcaatgcttg
atgtacgaagcggactatcggcacggcggacgtctcccggttcatgttcactttgtgatg
gacgagttcgccaatgtagcgcttcccgacgaatttgacaagctgctctccacgatgcgc
agccgggaaatttccgtttctatcattttgcaaaatttagcgcagctcaaggcgctgtac
aaggacgcatgggaatcgattgtgggcaactgcgacgaatttttgtacttgggcggcaac
gaacagtctacccacaaatacgtctcggagctgcttggtaaggaaacgattgacaccaat
acctacggccagagcaaggggagaaacggcagctactcgatcaattaccagcaatcaggc
cgcgaattgctcacacccgacgaggtgaggctgctggataaccgcttttgcctgctcttt
attcgtggcgaacatccagtccaggacgacaaatatgatttgctcaagcatcctcatgtc
tcgctaacgacggatggtaacggtcttccctttcagcatggcggcgcggaacacgctttg
gactggcaatccgtgttccttcatgaagacggggattatgaacttctttcggaagaagaa
gtagagtcgctatttatacgaagggaatga
DBGET
integrated database retrieval system
