KEGG   Corynebacterium heidelbergense: CHEID_02585
Entry
CHEID_02585       CDS       T08908                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
chei  Corynebacterium heidelbergense
Brite
KEGG Orthology (KO) [BR:chei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chei03400]
    CHEID_02585
Enzymes [BR:chei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CHEID_02585
    5.6.2.6  RNA 3'-5' helicase
     CHEID_02585
DNA repair and recombination proteins [BR:chei03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CHEID_02585
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: WCZ36082
LinkDB
Position
563155..568401
AA seq 1748 aa
MLDDPLEQFYPPVAAWFRDVFVEPTVVQSQAWSTIAAGKNALVVAPTGSGKTLAAFLWSL
SQLTRQENAPEGKGAGTKVLYISPLKALGVDVDRNLAAPLAGIARTAAAMETHVAPVRVG
VRSGDTPQSERSRLLRTPPEILITTPESLYLMLTSKAAGTLQTVDTVIVDEVHAVAGTKR
GAHLALSLERLEMITRQPVQRIGLSATVNPIDTVAAFLGGDRPVTVVNPKTHKDWDVNVC
SVVEDFQDPPAADEGDDPPDGQGPAEAGDAADAPDPSGVEAPSALVDEALLGPSLIGEGV
SEDPGAGARGEGGVEKESALPQQRSVWPHVQRAIYDQVMENRATLVFVNSRRAAERLTGA
LNELWAREHDPESLAASTRRDPAQLMARSERVTGSEAVIARAHHGSVSKDERADIEADLK
SGVLRCVVATSSLELGIDMGLVDRVIQVGAPPSVAAAVQRCGRAGHSVGATSRATIYPLH
KQDAESSVVVVDRMLRGELEPLHVVTNALDILAQQTVASAVQADVTAGLIGSGEDRDTNQ
QGSAEPSGAQTIPDGALSVEAWWGAVRRAYPFAALPREAFDATLELISGHYPSTDFADLK
PRAVYDATAGTLVARPGTQRVAVTSGGTIPDRGMFGVFLAAGEEAGARRVGELDEEMVYE
SRVGDIFTLGASSWRILEINRDQVIVAPAAGHTGRLPFWTGDAEGRPVELGRAIGENRRS
WGSGAPGDIRNRDFVDANTRANLDAFYANQKESAGIIPDERTILIERFRDEIGDWRVVVH
SPLGRGVNAPWAMALGAQLQRDTGIDAMAVAGDDGMVLRLPYSEEPPGADLLLGRGGVGG
DSSVAQISPTGHAGHIGSAGHTGHSGSAGVANGTEDGSDDTQAVLPQLDLGMGAGEDPAD
GVLADVMDNVGSSALFAGRFRECAARSLLLPRRNPGKRQPLWQQRQRAAQLLDVARPHPE
FPVMVETMRECLHDVYDLDSLGELIRQLGQRGAIRVAEVTTEGPGAFAESLLFTYTSAFM
YEGDSAERAAALAVDPALLAAVLGKSGGNLLLDPKIVRQVVETVQWLAEGRKAGTLEQVV
DMLRSLGPLTQEAIAQRFEPRGVAAEDVPELLDRGLKELIPHRLAQVSFGGRTKIAVVED
VPLLRDGLGVPVPPGVAADPTTIPDAIDQLLLRWMRHQGPIVARTAAEEFGLGVATAESI
LRRWVQERRLEAGTYLPGGTTQILGEAPAAAPTGEGGSDEGEAQYVDTSLLRRLRSATLA
AARGALEPVSRSTYARFLQAWHGIGESDRADLMGIIEQLAGIYLPASAWETLVLPARIPD
YRPGDLDELLNTGEVIAVGGGSAGSNDALVTLLPAIIAPALLAGVHPDAQDQTLGTVAAK
VLDHVRAGGAFLAAEIAAAVNAAHTEIDSAMWELFDAGLLSPDSFAPLRARLVSAGNTGK
SAHRAPRRDRGRGSTRKLRMGRSSFTQTARSEEARARRAAMSAYSNVPGRWSAVPQPQGI
SDADRAVALGEAWLDRYGVVTRGSIVAEKSDGGFAQAYRTLSAWEDSGAVLRGYIIDGLG
GAQFASRPVINQLRRMDALVPDENAAPEPTQNAASEPRPILLAATDPANPFGAALPWPSP
NAEGNPAPLQPASSPTPTSTSTPNSTPTATPTRSAGALVVIAGGRCLAHLTRGGRSITLF
PSLSFADTPTADTGAISGVLDALRAAIRSGRLSPVTVERINGQPVLDADTRPWVQAGARL
TPKGLTVR
NT seq 5247 nt   +upstreamnt  +downstreamnt
atgctggacgaccctctggagcagttttacccgcctgttgcggcgtggtttcgcgatgtc
ttcgtggagccgactgtcgtgcagtcccaggcgtggtcgaccatcgccgctggaaagaac
gctcttgtggtcgcccccacgggatcgggcaaaacgttggccgcctttttgtggtcactg
tcgcagctcacgcgccaggagaatgccccggagggtaagggggcaggtacgaaagtcctg
tacatctccccgttgaaagctctcggcgtggacgtggaccgcaacttggctgcgccgttg
gccgggatcgcccgtaccgccgccgcgatggaaacgcacgtcgccccggttcgggtgggg
gtgcgctctggggatacgccgcagtccgaacgctcacggttgctgcgtacccctccggag
attttgattacgacgccagagtccctctatctcatgctgacctcaaaggccgcggggacg
ctgcagacagtggatacggtgatcgtggacgaggttcacgcggtagccggcacgaagcgg
ggggcccacctggcgctgtcgttggaacgcctagagatgatcacccggcaacctgtgcag
cgcatcgggctgtcagccaccgtcaacccgatcgacacggtggccgctttcctcgggggt
gaccgtccagtgacggtggtgaacccgaagacccacaaggactgggacgtaaacgtctgc
agtgtggtcgaagacttccaggacccgcctgcggcggatgaaggtgacgatccgcccgac
gggcagggcccagccgaggcaggggatgccgctgacgcgccggatccgtctggcgtcgag
gccccatccgcgctggtggacgaggctttgctcggcccctcgctcatcggggagggggtc
agcgaggacccaggcgcgggggcgcggggggaaggtggcgtcgaaaaggaatctgccctg
ccgcagcagagatcggtctggccgcacgtgcagcgggccatctacgaccaggtgatggag
aaccgagccacgctggtcttcgtcaattcgcgccgggcggcagaacggttgacgggcgcg
ctgaacgaattgtgggcccgggagcatgacccggaatcgctggcggcctccacacgccgg
gatcccgcccagctcatggcgcggtcggagcgggtcacggggtcggaggccgtcatcgcc
cgcgctcaccacggcagcgtgtcgaaggatgagcgggcggacatcgaagcggacctgaag
tccggggtgctgcgctgcgtggtggcgacgagctcactggaactgggcattgacatgggg
ctggtggaccgggtgatacaggtgggcgcgccgccgtccgtcgccgcggcggtgcaacgg
tgtgggcgcgcggggcactcggtgggggcgacgtcgcgggcaacgatctacccgctgcac
aagcaggacgccgagagcagcgtcgtggtcgtggaccggatgctgagaggcgagctggag
ccgctacacgttgtgacgaatgccctggatatcctcgctcagcagacggtggcttccgcc
gtgcaggcagacgtgacggccgggctcatcggcagcggagaggaccgggatacgaaccag
cagggtagcgcggaacccagcggtgcccagaccatccccgacggcgccttatcggtcgag
gcttggtggggggcggtgcggcgggcctaccccttcgcggccctgccccgtgaggccttc
gacgccaccctcgaactcatcagcggccactacccctcgacggacttcgcggatctcaag
cccagggccgtctatgatgccaccgccgggaccctcgtggcccggccggggacccaacgg
gtggccgtgaccagcggcggaaccattccagatcggggcatgttcggcgtcttcctcgcc
gcgggggaggaggccggggcgcgccgggtcggtgagctcgacgaggagatggtctacgag
tcgcgcgtgggtgacattttcacgttgggggcctccagttggcggatcctggaaatcaac
cgcgaccaggtgatcgtcgcccccgcggcaggccacaccgggcggctgccgttctggacc
ggggacgccgagggcaggcccgtcgaattgggtcgggccatcggcgaaaaccgtagatcc
tggggttctggagcgcccggggacattcggaatcgggattttgtggacgccaatacccgg
gcgaatctcgatgcgttctacgcgaaccagaaagagtccgcgggcatcattcccgacgaa
cggactatcctgatagagcgattccgcgacgagattggggattggcgggtcgtggttcac
tcccccttgggccgtggggtgaatgcgccttgggcgatggcgctgggagcccagttgcag
cgagacacaggcatcgacgcgatggccgtggccggggacgacggcatggttctccggttg
ccgtactcggaggagccgccgggcgctgacctgctgttgggccgtggcggtgttggaggc
gactcgtccgtagcgcagatctcgcccacagggcacgccgggcatatagggtctgcgggg
cacaccgggcacagtgggtctgcaggcgtcgcgaatggcaccgaggatgggtccgacgac
acgcaggccgtactcccgcagctcgacctcggcatgggggccggggaggatccagcggac
ggggtactggcggacgtgatggacaacgttgggtcctccgccctgttcgccgggcgtttc
cgcgaatgcgctgcccgatccttgctgctgccccgacggaacccggggaaacgccaaccc
ctctggcaacagcggcagcgggcagctcagctcctcgatgtggcgcggcctcacccggag
tttccggtgatggtggagaccatgcgggaatgcctccacgacgtgtacgacctggacagt
ttgggcgagctcatccgccagctcgggcagcggggcgcgatcagggtcgccgaagtgact
acggaagggccgggcgccttcgccgagtccctgctgttcacctacaccagtgcattcatg
tacgagggagactccgccgaacgggccgcagctttggcggtggatccggcgctgctcgcg
gccgtactcggcaaatctgggggcaacctactattggatcccaagattgtccgccaggtg
gtggagacggtgcagtggcttgccgaaggccgcaaagccggcacgcttgagcaggtagtg
gacatgctgcgctcacttgggccgctcacccaggaagccatcgcccaacgcttcgaaccc
cgcggcgtcgcagcggaggacgtcccggagctactcgaccgcggcctgaaggaactcatc
ccgcaccgcctggcccaggtcagcttcggcggcaggacgaagatcgccgtggtggaggat
gtgcccctcctccgcgatgggctcggtgtgccggtgcctcccggggttgctgccgatccc
accaccattccggatgccatcgaccagttgcttctgcggtggatgcgtcaccagggtccc
atcgtggcccgcactgctgcagaggagttcggcctgggagtggcgaccgcagagtcgata
cttcgccgctgggtgcaggagcggcggctggaggctggaacctacctccccggcgggaca
acacagatcctcggggaggcacctgctgctgcgcccacgggcgagggcgggtccgatgag
ggggaagcccagtatgtggacacctccctgcttcggcggcttcgctcggccacccttgcg
gcagctcgtggtgccctggagcccgtgagccgatcgacttacgctcgcttcctccaggcc
tggcacgggattggggagtccgaccgggcagacctcatgggcatcatcgaacagctcgcc
gggatctacctacccgccagcgcctgggaaaccctggtcctgcccgcacgtatcccggac
tatcgacccggggacctcgatgagctgctcaacaccggggaagtcatcgccgtcgggggt
ggttccgccggtagcaacgacgctctggtcaccctcctgccagccatcatcgcccccgcg
ctgctcgctggagtgcaccccgatgcccaggaccagaccctgggcaccgtggcggcgaag
gttctcgatcacgtccgggcaggtggtgctttcctcgcagctgaaattgccgcggcagtg
aatgctgcgcacacggagatcgactccgccatgtgggaactgttcgatgccggcctgctc
agcccggattctttcgcgccattgcgcgcacgtctcgtcagtgcggggaacacgggtaag
agcgcccatcgtgcacccaggcgggaccgcggtcgggggagcacgcggaagctgcggatg
gggcgcagcagcttcactcaaacagcccgtagcgaggaagcgcgcgcgaggcgggcggcg
atgagcgcctattccaacgttcctggcagatggagtgcagtgccccaaccgcaggggatc
agcgacgcagaccgtgccgtcgcactcggggaagcatggctggaccgctacggcgtggtg
acccggggctcgatcgtcgccgagaagagcgacggcggattcgcccaggcctaccgaacg
ctttcagcgtgggaagattccggagcagtcttgcgcggatacatcatcgacggcttgggc
ggcgcccagtttgctagccgccccgtcatcaatcagcttcggcgcatggacgccctcgtc
ccagacgagaacgcagcccccgaaccgacccagaacgcagcttcggaaccgcggcccatc
ttgctggccgcgacggatccggcaaacccgttcggcgcggccctgccgtggccgtccccg
aacgcggaggggaacccagcgccgctgcaacccgcatcgtcgcccacccccacctccacc
tcaaccccgaactcaacccccaccgccactcccacgcgcagcgccggagccctcgtcgtc
atcgccggtggccgttgcctggcccacctaacccggggcgggcgcagtatcaccctcttc
ccatccctcagcttcgcggacacccccaccgccgataccggggccatttccggtgtcctc
gatgctctgcgcgcagcgatccgctccggacgcctgtccccggtgaccgtggagcgcatc
aacggccagccggtactggacgcagatacccgcccctgggttcaagccggggcgcggttg
acgccaaaaggattgaccgtgcgctag

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