Corynebacterium heidelbergense: CHEID_04400
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Entry
CHEID_04400 CDS
T08908
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
chei
Corynebacterium heidelbergense
Pathway
chei03030
DNA replication
chei03410
Base excision repair
chei03420
Nucleotide excision repair
chei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHEID_04400 (polA)
03410 Base excision repair
CHEID_04400 (polA)
03420 Nucleotide excision repair
CHEID_04400 (polA)
03440 Homologous recombination
CHEID_04400 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chei03032
]
CHEID_04400 (polA)
03400 DNA repair and recombination proteins [BR:
chei03400
]
CHEID_04400 (polA)
Enzymes [BR:
chei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHEID_04400 (polA)
DNA replication proteins [BR:
chei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CHEID_04400 (polA)
DNA repair and recombination proteins [BR:
chei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CHEID_04400 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHEID_04400 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WCZ36430
LinkDB
All DBs
Position
977454..980087
Genome browser
AA seq
877 aa
AA seq
DB search
MTPADANDKPTLLLLDGHSLAFRAFYALPAANFSTTGGQHTNAVYGFLGMFLGLMDNEHP
THVAAAFDLSGPTFREEKFPEYKAQRPAPPQEFRGQVDLIREALQSLGIATLDYEAHEAD
DVIASLATQAQRAGMRTLICTGDRDSLQLVSQDVTVLYTLKGVSDLHRFTPEAVEEKYGV
APAAYPDLAALRGDTSDNMPGVPGVGPKTAQKWINEYGSLQGVIDHIDEFKGKVGTSLRE
HIDEVTLAREITEMVRDLQLVDSLEDLRPKPVDAGQTLQFFERLQFGSNLRNRAFRIMGV
EYEDTTVRPITVDTPDRGKLASWLSKNLGYRPKGTTAPGPAAVWVAGEQLAIVGGENHGV
LLDLADSAEKDEGAVRHWLADPGSPKWVHDAKSSAHQLHAQGLHLDGVEHDAAIAAYLLR
PDLRTGELADVLQRYAGRDLPGNASPLDCAQAVAELTGILAAELNNNDLAELYFDLELPL
TMILARMETAGIAVDREALEDLSSDYGAKIDEEVTAARQEVDRPKLNLGSPKQLQEVLFE
DLDLPKTKKTKTGYSTAAGELEKLAAHTDHPFLRHLMAHREYQKMKTTIDGLIEAIAEDG
RIHTTFNQRGAATGRLSSVEPNLQNIPVRTDAGRRIREAFKVGEGYETLLTADYSQIEMR
VMAHLSEDAGLIEAYTRGEDLHNFVGSRVFDVPVDAVTPELRRRVKALSYGLVYGLSAFG
LSQQLKISGGEAKRIMENYFERFGGVKRYLDQVVEQAREDGYTHTLYGRRRYLPELTSAN
RVARENAERAALNAPIQGTAADIIKLAMIRVDRSLREAGLKTRVLLQVHDELVLEVAPGE
LERAKELLVEQMDNAASLRVPLDVSAGDGENWDLAAH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgactccggcggacgcgaacgacaagcccacgctactgctcctcgatggccactccctg
gcgttccgtgccttctacgcccttccagcagccaacttctccacgaccggtggccagcac
accaatgcggtctacggtttcctggggatgttcctggggttgatggataacgagcacccc
acccacgtcgccgccgctttcgacctgtccgggcctacgttccgggaggagaagttcccc
gagtataaggcgcagcgcccggccccgccgcaggaattccgcggccaggtcgatctcatc
cgggaagccctgcagagtctgggcatcgccacgctggattacgaggcccacgaggccgac
gatgtcatcgcctccctggccacccaggcgcagcgggccggaatgcgcaccctcatctgc
acgggggaccgggactcgctgcagttggtcagtcaggacgtcaccgtcttgtacaccctc
aaaggcgtgtccgatctgcaccggtttacgcccgaagccgtggaggagaagtatggggtg
gcccccgccgcctacccggacctggccgccttgcggggggacactagcgataacatgccg
ggggttcctggcgtcgggcctaaaacggcgcagaaatggatcaacgagtacggcagcctg
caaggggtgatcgaccacatcgacgaattcaaaggcaaagtgggcaccagcctccgtgag
cacattgacgaggtcaccctcgcccgcgagatcaccgaaatggtgcgcgacctgcagtta
gtggattccctggaggatctgcgccccaaaccggtcgacgcggggcagacgctgcagttc
ttcgaacgcttgcagttcggctccaaccttcgcaaccgggccttccgcatcatgggcgtg
gaatacgaggacaccaccgtgcgccccatcaccgtggacacccccgaccgcggaaaactg
gcctcgtggctgtccaagaacctgggttaccgccccaagggcaccaccgcaccgggtcct
gccgccgtgtgggtcgccggggagcagctcgccatcgtaggtggggaaaaccacggcgtg
ctgctggacctcgcggattccgcggaaaaggacgagggcgccgtccgtcattggctcgcg
gatcccggttcgccgaaatgggtgcacgacgccaaaagcagcgcgcaccagctacacgcg
caagggctgcacctggacggcgtggagcacgatgccgccatcgctgcgtatctactgcgt
cccgacctgcgcaccggggagctggcagatgtgctgcagcgttacgccggacgcgacctg
cccggcaacgccagccccctggactgcgcccaggccgtcgccgagctcaccgggatcctc
gccgccgagctcaacaacaacgacttggccgaactctacttcgaccttgagctccccctg
accatgatcctcgcccgcatggaaaccgccggcattgcggtagaccgggaggccctggag
gacctctcctccgactacggggccaagatcgacgaggaggtcaccgccgcgcgccaggag
gtagatcggccgaagctcaacctcggcagccccaagcaactacaggaggtgctgttcgag
gacctcgacctgcccaaaaccaagaagacgaagacgggttactccaccgccgcgggggaa
ctggagaaactagccgcgcacaccgaccaccccttcctgcggcacctcatggctcaccgc
gagtaccaaaagatgaagacaaccatcgacgggcttatcgaggccatcgccgaggacggt
cggattcacaccaccttcaaccaacgcggtgccgcgacggggcggttatcctccgtggaa
cccaacctgcagaacattccggtgcgcacggacgccggacggcgtatccgagaggccttc
aaagtgggggagggatacgaaaccctgctcaccgccgattactcccagatcgagatgcgg
gtcatggcccatttatctgaggacgccggactcatcgaggcctatacccgcggcgaggac
ctccacaacttcgtgggctccagggttttcgacgtccccgtggatgcggtaactcccgaa
ctgcggcggcgggtgaaagccctcagttacgggctggtgtacggtctgtccgcatttggg
ttatcgcagcagttgaagatctccggcggcgaggccaaacgcatcatggagaactacttc
gaacggttcggcggggtgaagcgatacctggaccaagttgtggaacaagcccgggaggat
ggctacacccacaccctctacgggcggcgccggtacctgccggagctaacctccgccaac
cgagtggcccgggagaatgccgagcgagccgcgctgaacgcacctatccagggcaccgcg
gcagacatcatcaagctcgccatgatccgggtggaccgcagcctgcgggaagccgggctg
aaaactcgcgtgctgctccaggtgcatgacgagctagtcctggaagtggcacccggggag
ctggagcgggcgaaggagttgctcgtggagcagatggacaatgccgcgagcctgcgggtg
ccgctggacgtgtccgcgggggatggggagaactgggatttggcggcgcactag
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