Corynebacterium heidelbergense: CHEID_04905
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Entry
CHEID_04905 CDS
T08908
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
chei
Corynebacterium heidelbergense
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
chei03051
]
CHEID_04905 (pafA)
Enzymes [BR:
chei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CHEID_04905 (pafA)
Proteasome [BR:
chei03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CHEID_04905 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WCZ36524
LinkDB
All DBs
Position
complement(1091669..1093111)
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AA seq
480 aa
AA seq
DB search
MSAAEPLVRRIMGLETEYGVANVRDAVRRLGPDEVARQLFAPVVEEFRSSNIYTTNGSRL
YLDVGAHPEVATAECDSLHQLVTYDRAGDAEVQALAEAAEASLASGGQVHVFKNNTDFVG
NSYGCHENYLVGREMPLRALSAQLLPFLVTRQLICGAGKVSVPQPGAPNENFGPGFVMSQ
RADHVWEGVSSATTRSRPIINTRDEPHADSSRYRRLHIIVGDSNMSEVTTALKVGATLLV
LEMIEAGVALPDFEMANEIRSIRDIARDITGTAPLRLRRSGAFTTALEVQETLVDAADRW
LAVRPEPERGPSDWLGTPREQLRPVVDLWRKVVDCFHTQDFSPVDQHIDWVIKRKLIERL
AARDGLSITSPKLAQVDLMYHEINPRRGLFHRLQQRGLAADLLRPEDIAMARSTPPQTTR
AALRGAFLSAARAGGREVTVDWMRMKINGESPLEVVLPDPFAAHNETVDRMVALLSEGTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctgccgagccactggtgcggcgcatcatggggctggagacggagtacggcgta
gccaacgtccgcgatgccgtccgccgcctcggcccagacgaagtcgcccgccagctcttc
gccccggtggtggaggagtttcgcagctccaacatctacaccaccaacggttctcgcctg
tacctggacgtaggggcccatccggaggtggccacggcggagtgcgacagcctccatcag
ctcgtgacctatgaccgcgccggcgacgccgaggtccaggcccttgcggaggccgcagag
gcctcgctggccagcgggggccaggtacacgtgttcaagaacaacacggacttcgtgggc
aactcctatggctgccacgaaaattaccttgtggggcgggaaatgccgctgcgggccctg
tccgctcaactgctgcccttcttggtcacccgccagctcatctgcggggcgggaaaggtg
tccgttccccagccgggcgcgcccaacgagaacttcgggcccgggttcgtcatgagccag
cgggccgatcacgtgtgggagggcgtttctagcgcaacgacccgctcccggccgatcatc
aatacgcgggacgaaccgcacgcggactcctcgcgctatcggcgcctccacatcatcgtt
ggggattccaacatgtcggaggtgaccacggcgctgaaggtcggggccaccctcctggtg
ttggagatgatcgaggccggggtggccctaccggacttcgagatggccaacgagatccgc
tcgatccgggacatcgcccgggatatcaccggtacggccccgctgcggttgcggcgctcg
ggagccttcaccacggcgttggaggtccaggaaactcttgtggacgccgccgaccggtgg
ttggctgtgcgccccgagccggagcgtggaccgtccgactggctgggcactccccgggag
caactgcggccggtagttgacctgtggcgcaaggtggtcgactgcttccacacccaggac
ttttcccccgtagatcagcacatcgactgggtgatcaagcgcaagctgatagaacggctc
gccgcgcgcgacgggctgagcatcacaagccccaaactggcccaggtggatctgatgtat
cacgagatcaacccccggcgcggcctcttccaccgcttgcagcagcggggcctggccgct
gacctgctgcgcccagaggacatcgccatggcccggagtacgcccccacagacgacgcgg
gcggcgctgcggggcgccttcctctcggcggcgcgagcgggaggccgggaagtcacagtg
gattggatgcggatgaagattaacggggaatcccccttggaagtcgtgctgcccgatccc
ttcgcggcgcacaatgagacagtggatcgcatggttgccctgttgagcgaaggcaccgct
taa
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