Corynebacterium heidelbergense: CHEID_06870
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Entry
CHEID_06870 CDS
T08908
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
chei
Corynebacterium heidelbergense
Pathway
chei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHEID_06870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chei03021
]
CHEID_06870
03019 Messenger RNA biogenesis [BR:
chei03019
]
CHEID_06870
Transcription machinery [BR:
chei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CHEID_06870
Messenger RNA biogenesis [BR:
chei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CHEID_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
WCZ36908
LinkDB
All DBs
Position
complement(1537844..1539871)
Genome browser
AA seq
675 aa
AA seq
DB search
MENFPPNALPSAANRLFFFPFFCPANRGMRPPQAVCGNVEKHRYAMFGNSERTFVSLSDI
LNRAQANGLASLKLPELRQIAAAQGLRGTSALRKGELISVIQSGGARGGQAGNSGDSSLS
DATPPRATSAQSSAPQQDPESKHEAEDQRNNRENRVNRDEPNGRDGGGDSVDRNENGGDN
RHADKGDTGTNNSGNNDGGNNDDSKRHDGSGREHRNRHHDGEGRRSRRNRRNRRNRNERN
NRNDRNDRGGNNGGDRNNRRNRDDRDNRPDNDAEDNNPQSGGEQNLAQVAGILDVADANT
AFIRTTGYHAGPTDVYVPVNTARKYGMRHGDAIVGAIKPRSNNNNQGNASGGRGRHRQKY
TPIHSVESVNGLSPEQASQRPDFAKLTPLYPNQRLRLETDPKTLTTRVIDLIMPIGKGQR
ALIVSPPKAGKTTILQDIANAISTNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFD
RPPSEHTAVAELAVERAKRLVEQGKDVVLLLDSITRLGRAYNNSSPASGRILSGGVDSNA
LYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDMVIFEEFKGTGNAELKLDRKISERR
VFPAVDVNPSGTRKDELLLGPDEARIMHKLRRILSALDPQAAIDLLIKQLRKNKTNRDFM
LQIASSAPLADEETD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttccctccgaatgcgctgcccagtgccgctaaccggcttttcttcttcccc
tttttctgcccggccaatcggggcatgaggcccccacaggctgtgtgcgggaatgtggag
aagcaccgatatgccatgtttggtaacagtgaaaggaccttcgtgagcctgtccgacatt
cttaaccgggctcaggccaatggccttgcctcccttaagcttcccgagttgcgccaaatt
gcggccgctcaggggttgcgcggcacctctgcgctgcgcaagggcgaattaatcagcgtg
atccaatccggtggggcccgtggcgggcaggccggtaattccggcgattcttctctttcg
gacgccaccccaccgcgcgccacttctgcgcaatcctcggcgccgcaacaggaccctgag
tcgaagcacgaggccgaggaccagcgcaacaaccgtgagaaccgagtgaaccgagacgaa
cccaacggccgggatgggggaggagactccgtggaccgcaacgagaacggcggggataac
cgtcacgcggataaaggcgacactggcacgaacaacagcggaaataacgatggcggcaat
aacgatgacagcaagcgccacgatggttcgggccgggagcatcggaatcgccaccatgac
ggggagggcaggcgcagccgccgcaaccggcggaaccggcgcaatcgcaacgagcgcaac
aacaggaacgaccgcaacgaccggggcggcaataacggtggggatcgcaacaaccgccgc
aaccgggatgaccgcgataaccgcccggacaatgacgctgaggacaacaacccccagtcc
ggtggcgagcagaatctggcccaggtcgcgggaattctagacgtcgcggatgccaacacc
gccttcatccgcaccaccggatatcacgcgggacccacggacgtctatgtgccggtaaat
actgcccgcaaatacgggatgcgccacggcgatgccattgtgggtgcgatcaagccgcgc
agtaacaacaacaaccagggcaatgcatccggtggacgcggccggcaccggcaaaagtac
acgccgatccacagcgtggaatccgtcaatggcctttccccggagcaggcgtcccagcgc
ccggatttcgcgaagctcaccccgctctaccccaaccagcgcttgcgcctagagacggac
ccgaagaccctcaccacccgcgtgatcgacctcatcatgcccatcggtaagggccagcgc
gcgctaatcgtctccccgccgaaggccggtaagacgaccatcctccaggacatcgccaac
gcgatctccacgaacaacccggagtgctacctcatggtcgtgctcgtcgacgagcgaccg
gaggaagtgacggacatgcagcgcagcgtgaagggggaggtcatcgcctcaaccttcgac
cgcccgccgtcagagcacaccgccgtggctgagctcgccgtggagcgagccaagcgcctg
gtggaacagggcaaggacgtggtgctgctgctggactccatcacccgtctcgggcgcgcc
tacaacaactcctccccggcctccggccgcatcctctccggcggtgtggactccaacgcc
ctgtacccgccgaagcgattcctgggagccgcgcgcaacatcgaaaacggcggcagcctg
accatcatcgccaccgccatggtggagaccggctctgcaggagacatggtcatcttcgag
gagttcaagggcaccggcaacgcggagctcaagctggatcgcaagatctccgagcgtcgg
gtattcccggcggtggacgtcaacccctccggcacgcgcaaggacgagctgctgctcggc
ccggacgaggcgcggattatgcacaagctgcgccgcattctctccgccctggacccccag
gccgccatcgacctgttgatcaagcagctgcggaagaacaagactaaccgggacttcatg
ctgcagatcgccagctccgccccgctggcggatgaggaaaccgactag
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integrated database retrieval system
