Corynebacterium heidelbergense: CHEID_08170
Help
Entry
CHEID_08170 CDS
T08908
Symbol
uvrD3
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chei
Corynebacterium heidelbergense
Pathway
chei03420
Nucleotide excision repair
chei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHEID_08170 (uvrD3)
03430 Mismatch repair
CHEID_08170 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chei03400
]
CHEID_08170 (uvrD3)
Enzymes [BR:
chei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHEID_08170 (uvrD3)
DNA repair and recombination proteins [BR:
chei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHEID_08170 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CHEID_08170 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WCZ37164
LinkDB
All DBs
Position
complement(1815639..1819172)
Genome browser
AA seq
1177 aa
AA seq
DB search
MHPEHISGPGVTPERLSKLVGQKHPPTPEQAAVISAPPTGNYLVVAGAGAGKTETMAARV
VWLVANGYVNPENVLGLTFTRKAATELRQRIRSRLQALANSEFMQDLPAEDPRRAALQNI
APAVSTYDSYAGTIVREYGLLIPVEPATRIITEAERWILLRDVALEWQGRVRAYAQVPEL
IKAVKQLSDEMDNHLIEPAEVAEETQSAIDELLAVAGTAADGVTPKLNQDNEKFLTAQRT
RLELLPVVAAYRARLDELQLMTFSQQMTKAAQLVVAHPQVGEAQRRRFHVVMLDEYQDTG
HAQRVFLRSLYGQGSTPAPMVTAVGDPMQSIYGFRGATASNLENFRTDFPVGDEPARKLE
LTTSFRNPAGVLDLANEVSAWSMEVAGMRVGERPVSPLTAGPNAQEAQINVGFFDEREQE
LDWLADELARHWEEHLRAEGGTFSAAVLVRRNMDAPPIYAKLRERGVPAEMTAGPGLLDQ
PEVADVYATLRVLVDPTDDVAMLRLLTSPRWNIGAADLAVLSERTAQIQHRGSQVAAEPQ
ELPAHLAGIDSPLAETLAELIPNPAEGTVGLAEAAADFSDAVDQGMSPAGAQRIAALAAE
LGYLRRHSLGKALPDLVADIERMIGMRVEVLTRWHADAESALGTSHLDRFAEVVRGFAEV
GGTDPAALVDYLRAAHDQEAGLEPGEVSKRENTVQILTVHKAKGLEWDIVAVPHCDRSAY
DDATCPKSARTWASAPALVPSALRGDADGPHAFPVLDTAEVGTHTDHKKAVMDFVSRVRA
YGAKESDRVFYVAITRTQRVLLASGSAFSPQGGQGAKDPAVALTLLRNALSPDVVFSDPG
TPPLAHPGRPVVHWSALRAKVTSKHLKAVEDGQLTREDELMFPSAAHLDLSADYAARRDA
EAAQGDPDPRSLPHWPQEPLSQRDPDFAEAVALVTRADPKQAPASSSELAQQWCAETELL
LEEHAAELREKVVVPLGARLTATEAVSLRRDEEEFARRRRRPVPLRPQPMAKRGTAFHNW
VEQHYHITSLMDYDELPGASDASLQDPQLAELKRQFLASEWANRQPESVEGAYSVTIGRY
VFEGRIDAVFHDATDPARGWLVLDWKTGSKPGPAEMPAAIMQLAVYRLAWARVLSAELGV
HVPEQNVRAAFHYVKANETFEPDTLPDAEELERLIDG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccgaacacatttccgggcctggcgtcaccccggaacggctatccaagctggtg
ggccagaagcatccgcccaccccggaacaggccgccgtgatttcggccccacccaccggc
aactacctggtggtcgccggggccggggccggaaaaaccgagacgatggctgcccgggtg
gtctggctggtagccaacggatacgtcaacccggagaacgtgctgggcctgaccttcacc
cgcaaggccgccacggaactgcgccagcgcattcgcagccggctccaggccctggccaac
agcgagttcatgcaggatctgcccgccgaggatccccggcgcgcggccctgcagaacatt
gccccggcagtgtccacctacgactcctacgcgggcacgatcgtgcgggaatacgggctg
ctcatccccgtggagccagccacccgcattatcaccgaggccgagcgctggatcctgctg
cgcgatgtggccctcgaatggcaggggcgggtgcgggcctacgcccaggtgccagagctg
atcaaggcggtgaagcagctatcggacgagatggataaccacctcatcgaaccggcggag
gtagcggaggaaacccagagcgccatcgacgagctgctggcggtggccgggaccgcagcc
gatggcgtgacccccaagctgaaccaggacaacgagaagttcctcaccgcgcagcggacc
cgcctggagttgctgccggtggtcgcggcctaccgggcgcggctggacgagctgcagttg
atgaccttcagccagcagatgacgaaggccgcgcagctcgtggtggcccacccgcaggtg
ggggaggcccagcgccgccgcttccacgtggtgatgctggacgagtaccaggacaccggc
cacgctcagcgcgtcttcctgcgcagtctgtacgggcagggcagcacgccggcgcccatg
gtgactgcggtgggggatcccatgcagtccatctacggatttcgcggggccacggcttcc
aacctggagaacttccgcaccgatttccccgtcggcgatgagccggcccgcaagctggag
ctaaccacctccttccgcaacccggccggggtgctcgacctggccaacgaggtgtccgcc
tggtccatggaggtcgcaggcatgcgggtgggggagcgcccggtctccccgctgacggcc
ggccccaacgcgcaagaagcccagatcaacgtgggcttcttcgacgagcgcgagcaggag
ctggactggttggccgacgagctggcgcggcactgggaggaacacctgcgcgcggagggc
gggaccttcagcgcggccgtgttagttcgccggaacatggacgccccgcccatctacgcc
aagctgcgggagcggggcgtgcccgccgagatgacggcgggccccggccttctggaccag
ccggaagtggccgatgtgtatgcgaccctgcgcgtgctggtggatcccaccgatgacgtc
gccatgctgcggctgctcaccagccccaggtggaacatcggtgccgcagacctggcggtc
ctgtccgagcggaccgcccagatccagcaccgggggagccaggtggccgccgaaccccag
gaactgcccgcccacctggccggcattgactcgcccttggccgagacactggcggagctc
atccccaaccccgctgagggcacggtggggttggcggaggcggcggcggatttttcggac
gccgtggaccaggggatgagcccggccggggcccagcggatcgcagccctcgccgcggaa
ctgggctacctgcgccggcacagcctgggcaaagccctgccggacttggtggcggacatc
gagcgcatgatagggatgcgggtggaggtgttgacccgttggcacgccgacgcggaaagc
gccctggggaccagccacctggaccgtttcgcggaggttgtgcgcggatttgcggaggtg
gggggcacagatcccgccgccctcgtggactacctgcgggccgcccacgaccaggaggcg
ggcctggagccgggggaggtcagcaagcgggaaaacaccgtgcagatcctcaccgtgcac
aaggccaaggggctggagtgggacatcgtcgccgtgccccactgcgaccgcagcgcctac
gacgacgccacctgccccaaatccgcgcggacctgggccagcgccccggcactggtgccc
tccgccctgcgcggagacgccgacgggccccacgccttccccgtgctggataccgccgag
gtcggcacccacaccgaccacaaaaaggccgtgatggacttcgtctcccgggtgcgggcc
tacggggccaaggagtcggaccgcgtcttctacgtggctatcacccgcacccagcgggtc
ctgctggccagcggttccgctttctccccgcagggcggacagggggccaaggacccggca
gtggccctcaccctgctgcgcaatgcgctcagtcccgatgtggtgtttagcgatccgggc
acgcccccgctggcccatcccggacgaccggtggtgcactggtccgcactgcgggcgaag
gtgacttccaagcacctcaaggccgtcgaggacggccagctcacccgggaggatgagctc
atgttccccagcgccgcccacctggatctcagcgcggactacgcggcgcggcgcgatgcg
gaggcggcgcagggcgatcctgatccgcgatcgctcccgcattggccgcaagaacctcta
tcccagcgggacccggacttcgcggaggcagtggccctcgtcacccgcgcagaccccaaa
caggccccggcctcctcctccgagctggcgcagcagtggtgcgctgagacggagcttttg
ctggaggaacacgccgccgaactgagggagaaggtggtggtgcccctcggcgcccgcctc
accgccacggaggccgtctccctgcgacgcgatgaggaggagttcgcccgccgtcggcgg
cgccccgttcccttgcgtccacaaccaatggccaaacggggaaccgcattccacaactgg
gtggaacagcactaccacatcacttctctcatggactatgacgagctgcccggcgcctcc
gacgctagcctccaggacccccagctcgccgagctcaagcggcaatttctcgcctccgaa
tgggccaaccggcagccggagagcgtggagggggcctactccgtcaccatcggccggtat
gtcttcgagggtcggatcgacgccgtttttcacgacgccaccgacccggcgcgtggctgg
ctggtcctcgattggaaaacgggcagcaagccggggcccgcagagatgcccgcggccatc
atgcagttggcggtgtaccggctggcctgggcgagggtgctatccgccgagctgggcgtc
cacgtgcccgagcagaatgtccgcgccgccttccactacgtgaaggccaacgagaccttc
gaaccggatacactgccagatgctgaagaattagaacggttgatagatggatga
DBGET
integrated database retrieval system
