Corynebacterium heidelbergense: CHEID_09125
Help
Entry
CHEID_09125 CDS
T08908
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
chei
Corynebacterium heidelbergense
Pathway
chei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHEID_09125 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chei03021
]
CHEID_09125 (rpoC)
03400 DNA repair and recombination proteins [BR:
chei03400
]
CHEID_09125 (rpoC)
Enzymes [BR:
chei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHEID_09125 (rpoC)
Transcription machinery [BR:
chei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHEID_09125 (rpoC)
DNA repair and recombination proteins [BR:
chei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHEID_09125 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WCZ37355
LinkDB
All DBs
Position
complement(2018640..2022608)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITTVDEEGRHNDQSTLEAEMLLEKKEVEVDRDNELAERSKKLEAD
LAELEAAGAKNDAKRKVQTAAEREMRHIRERAEREVDRLDEIWNTFVKLAPKQMIVDENI
YNELVDRYEDYFTGGMGAESIQKLIRSFDLEAEADNLREIIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDSIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPILVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTLVKGRNEVGGQ
GAYSPATQEAPAQGVYSSLAEAIMAYDRGVLGLQAPIKVRISHLRPSADVEAELFPDGWE
RGQTWLADTTLGRVLFNELLPWNYPYVEGVMAKKPQAAVINDLAAKYPMITVAQTVDKMK
DAGFYWATRSGVTITMHDVLVLPNKAEVLDSYEAKARVIEKKLARGKINEAERYQSLVDL
WKEATDFVGQSVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSRGEYITRPVK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTSQGV
VLPVSTAVTDAEGKPTGTFVRADFVETSVVGRYLAADAKDLAGDVVLPAGNVVGEVELEE
LIARGVPEVKVRSVLTCATATGVCSTCYGKSMATGKKVEIGEAVGIVAAQSIGEPGTQLT
MRTFHLGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGTVKLEDDEHFYTLTIQPDDG
SDDVVYEKLSKRQGLASLGTGGVERPIRNGDHIKMGQQLLKGAADPHEVLRVLGRRGVQQ
HLIGEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASKE
AVKTGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGISRYRNITVEPTEEARAAAYSLPNSFGDGFYSDDGYGEFTGAAVPLDDM
GM
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaatttcttcgatgagctccgcatcgggctcgccactgccgatgacatc
cgccgctggtcccggggcgaggttaaaaagccggagaccatcaactaccgcacgctgaag
ccggaaaaggacggtctcttctgcgagcggatcttcgggcccactcgcgactgggagtgt
gcctgcggcaagtacaagcgcgttcgttacaagggcattatctgcgagcgctgcggcgtg
gaagtgaccaagtccaaggtgcgccgtgagcggatgggccacatcgagctggccgctccg
gtcacgcacatctggtacttcaagggcgtgccctcccgcctgggctacctgctggacctg
gctccgaaggatctggagaagatcatctacttcgccgccaacatcatcaccaccgtggac
gaagagggtcgccacaacgaccagtccacccttgaggcggagatgctgctggagaagaag
gaagtggaggtcgaccgcgataacgagttggccgagcgttccaaaaagctcgaggctgac
ctcgccgagctggaggctgcgggcgctaagaacgatgccaagcgcaaggtgcagactgcg
gccgagcgcgagatgcgccacatccgcgagcgcgccgagcgcgaagtggaccgcctggac
gagatctggaacaccttcgtcaagctggcccccaagcagatgatcgtggatgagaacatc
tataacgagcttgtcgaccgctacgaggattacttcaccggcggcatgggcgccgagtcc
atccagaagctcatccgcagcttcgatctggaggccgaggcggacaacctccgcgagatc
atccgtgacggtaagggccagaagaagctgcgcgccctcaagcgcctcaaggtcgtggcc
gccttcctgcgctccggaaacgatcccgcgggtatggtcctggactccatccccgtcatt
ccgccggagctgcggccgatggtccagctcgacggtggacgcttcgccaccagcgacctc
aacgacctgtaccgccgcgtcatcaaccggaacaaccggctcaagcgcatgctggacctc
ggggcccccgaaatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgccggggccgccccgtcacgggtcccggtaaccgtcccctgaag
tccctgtccgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccgggcgttccgtgatcatcgtcggcccccagctcaagctgcaccag
tgtggtctgccgaaactcatggccctggagctgttcaagccgttcgtgatgaagcgactg
gtggagaagagctacgcccagaacatcaagtccgccaagcggatggtggagcgccagcgc
cccgaggtgtgggacgtgctggaggaggccatcgccgaacacccggtgatgctcaaccgt
gcaccaaccctgcaccgcctgggcatccaggccttcgagcccattctcgtggagggcaag
gccatccagttgcacccgctggcctgtgaggcattcaacgcggacttcgacggcgaccag
atggccgtgcacctgccgctgtctgccgaagcacaggccgaggcgcgcgtattgatgttg
gcgtccaacaatattttgtcccccgcatcgggcaagccgctggccatgccgcgcctggac
atggtgaccggcctgtactacctgacgttggtcaaggggcgcaacgaagttggcggccag
ggtgcctacagcccggccacgcaggaggctccggcgcagggcgtgtactcctccttggcg
gaggccatcatggcctacgaccgaggcgtgctggggctgcaggcaccgatcaaggtgcgg
atcagccacctgcgcccgtctgcggatgttgaggccgaactgttccccgatgggtgggag
cgcggccagacgtggttggccgataccaccctcggccgggtcctgttcaacgagctgctg
ccgtggaactacccctacgtggagggcgtgatggccaagaagccgcaggctgccgtcatc
aacgacctcgccgcgaagtaccccatgatcaccgtggcgcagaccgtggacaagatgaag
gacgccggcttctactgggccacccgctctggcgtgaccatcaccatgcacgacgtgctc
gtgctgcccaacaaggcagaggtgctggacagctacgaggccaaggcccgcgtcattgag
aagaagctagcccgcggcaagatcaacgaggccgagcgctaccagtccctcgtggacctg
tggaaggaagcgacggacttcgttggccagtccgtggaggatctgtacccggacgacaac
ccgatccccatgatcgtgaagtccggtgcggccggtaacatgcgccagatctggaccctg
gccggcatgaagggcatggtgacgaactcccgcggtgagtacatcacccgcccggtgaag
acctccttccgcgagggcctgtccgtgctcgagtatttcaacaactcccacggctcccgc
aagggcctggccgacacggcgctgcgtaccgcagactccggttacctgacccgccgcctc
gtggatgtggcccaggacgtcatcgttcgcgaggacgactgcggcacctcccagggcgtt
gtgctgccggtctccaccgcggtgacggacgccgagggcaagcccactggcaccttcgtg
cgggccgacttcgtggagacctccgtggtcggccgctacctcgctgccgatgccaaggac
ctggctggcgacgtggtactaccggccggcaacgtggtgggcgaggttgagctggaagag
ctcatcgcccgcggggtgccggaggtgaaggttcgctccgtgctgacctgcgccaccgcc
accggcgtatgctccacctgctacggcaagtccatggcgaccggcaagaaggtcgagatc
ggtgaggccgtgggcatcgtggccgcccagtccatcggcgagcccggtacccagttgacg
atgcgtaccttccacctcggtggcgttggtggcgacatcaccggcggtctgccccgtgtg
caggagctgttcgaggcccgcgtgcccaaggcgaagtccccgatcgcttccgtggacggc
accgtcaagctggaggacgacgagcacttctacacgctgacgatccagcccgacgacggc
tcggacgacgtcgtgtacgaaaagctctccaagcgccagggcctggcctcgctgggcacc
ggtggcgtggagcgcccgatccgcaatggcgaccacatcaagatgggccagcagctcctc
aagggcgccgcggacccccacgaggttctgcgcgtcctcggccgccgcggggtgcagcag
cacctcatcggcgaggtccagaaggtctaccgggaccagggtgtggctattcacgacaag
cacatcgagatcatcgtgcgccagatgctgcgccgcgtgacggtcatcgactccggctcc
acggagttcctgccgggctccctggtggagcacgcggatgccgtggccgcctccaaggag
gccgtgaagaccggtggccgcccggtggaggtgcgtgccgagatcatgggcatcaccaag
gcctccctggctaccgagtcctggctgtccgccgcctccttccaggagacgacgcgtgtg
ctcacggatgccgccatcaacaagcgctccgataagctcatcggcctgaaggagaacgtg
atcatcggtaagttgatcccggctggcacgggtatctcccgctaccgcaacatcacggtg
gagccgacggaggaggcgcgcgccgctgcctactccctgccgaacagcttcggcgacggc
ttctacagcgacgatggctacggcgagttcaccggtgccgcagtgcccctggatgacatg
ggcatgtag
DBGET
integrated database retrieval system
