Chelatococcus sp. CO-6: AL346_00445
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Entry
AL346_00445 CDS
T04040
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chel
Chelatococcus sp. CO-6
Pathway
chel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL346_00445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chel03021
]
AL346_00445
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_00445
Enzymes [BR:
chel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL346_00445
Transcription machinery [BR:
chel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL346_00445
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL346_00445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
HHH_XRCC3_RpoA
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ALA16143
LinkDB
All DBs
Position
complement(79927..80943)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPNKLEVSPGDDARRVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
AVHIDGVLHEFSSIPGVREDVTDIVLNIKTIAVKMQGDGPKRMTLRKQGPGVVTAGDIAT
VGDVEILNPELALCTLDEGAEIRMEFTVNTGKGYVAAEHNRPEDAPIGLIAVDSLYSPVK
KVSYRVENTREGQILDYDKLTMTVETNGAVSPEDAVAYAARILQDQLAVFVNFEEPRREE
AAVSTPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLASMGLHLGMEVSGWPPDNIDELAKRFEEHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaactggcaagagctcatcaagccgaacaagctcgaggtgtcgccgggt
gacgatgccaggcgcgtggcgacggtcgtcgccgagccgctggagcgcgggttcggcctg
acgctcggcaacgcgctgaggcgcgtgctgctgtcgtcgctgcagggcgcggcggtgacg
gccgtgcacatcgacggcgtcctgcacgagttctcgtccattcccggcgtgcgggaggac
gtgacggacatcgtgctcaacatcaagaccatcgcggtcaagatgcagggcgacggcccc
aagcgcatgacgctgcgcaagcagggcccgggcgtcgtcaccgcgggcgatatcgccacg
gtcggcgatgtggagatcctcaacccggagctggccctgtgcacgctcgacgagggcgcg
gagatccgcatggagttcacggtcaacacgggcaagggctacgtggcggccgagcacaac
cgtcccgaggatgcgccgatcggcctcatcgccgtcgacagcctctacagcccggtcaag
aaggtctcctaccgcgtggagaacacgcgtgagggccagatcctcgactacgacaagctg
acgatgacggtcgagacgaacggggccgtcagcccggaggacgcggtggcctatgccgcg
cgcatcctgcaggaccagctcgccgtgttcgtcaacttcgaggagccccgccgcgaggag
gctgccgtctcgacgccgcagctgcccttcaacccggcgctgctcaagaaggtggacgag
ctcgagctctcggtgcgttcggccaactgcctcaagaacgacaacatcgtctacatcggc
gacctcatccagaagacggaagccgagatgctgcgcacgccgaacttcggccgcaagtcg
ctcaacgagatcaaggaagtgctcgcctccatgggcctgcacctcggcatggaagtgagc
ggctggccgccggacaacatcgacgagctcgccaagcgcttcgaggaacactactga
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