Chelatococcus sp. CO-6: AL346_00595
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Entry
AL346_00595 CDS
T04040
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
chel
Chelatococcus sp. CO-6
Pathway
chel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL346_00595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chel03021
]
AL346_00595
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_00595
Enzymes [BR:
chel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL346_00595
Transcription machinery [BR:
chel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL346_00595
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL346_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
ALA16173
LinkDB
All DBs
Position
complement(98765..102958)
Genome browser
AA seq
1397 aa
AA seq
DB search
MNQEVMNLFNTQAPAQTFDQIKISLASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVIEPGITPLKERQLLSEEEYLRAQDEYGEDSFTA
MIGAEAIREILRSLDLEKIAADLRQEIATTTSELKPKKLMKRLKIIEAFIQSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGLSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYLSILAEGEPGEGKVFADMGELEHALA
AKVVTLHSKIKYRWTGVAEDGSTYSKVYETTPGRVILSRVLPKHPAVPFDVVNKLMTKKE
ISNMIDTVYRNCGQKESVIFCDRIMGLGFYHAFKAGISFGKDDMVVPENKWSIVDETRAL
VKDYEQQYQDGLITQGEKYNKVVDAWAKCSDRLAGEMMARISAVQKDESGRDKPVNSIYM
MAHSGARGSPAQMKQLAAMRGLMAKPSGEIIESPIISNFKEGLDVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDAVIREPDCGTDKGIRMRAIVDAGQIVASLASRILGRTA
AEDLVDTDGKVIVPAGTMIEEWHIEPITTAGIQEVKIRSVLTCEAKNGVCATCYGRDLAR
GTPVNYGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADQSFVESNFEGTVKIRNRNVA
RNSDGDLIAMGRNLAVLIVGPDGQERAVHRIQYGARLKVDEGDTIKRGQRIAEWDPYTRP
ILTEVDGVVGFEDLVEGASMSEQIDESTGIAKRVVIDWRGSARTSDLRPAIVIHDENGKI
AKLARGGEARSLLAVEAIIGVDPGAKVKAGDVLARIPMESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEKSGTIQFGRDYKNKRRLTLIPHDGSDSVEYLIPKGKHIHLQDGDVVEVGD
FIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKVEIQE
AGDSEFLQGEQVDRLEMEEANETLVAEGKKPASGTPVLLGITKASLQTRSFISAASFQET
TRVLTEAAVNGKTDTLEGLKENVIVGSLIPAGTGAVAARLREIAQRRDELILAQKANESG
QAAAAAVGGELPPAAAE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggtcatgaatctcttcaatacccaggctccggcgcagaccttcgaccag
atcaagatctcgctcgccagcccggagaagattctgtcctggtcctacggcgagatcaag
aagccggagacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgcgcg
cggatcttcggcccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tataagggcgtcatctgcgagaagtgcggcgtcgaggtgacgctggcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgcggcgcccgtcgcgcacatctggttcctgaagtcg
ctgccctcgcgcatcggcctgctgctcgacatgacgctcaaggatctcgagcggatcctc
tatttcgagtactacgtcgtcatcgagccgggcatcacccccctcaaggagcgtcagctc
ctgtcggaggaggagtacctgcgcgcgcaggacgagtacggcgaggacagcttcacggcg
atgatcggcgccgaggcgatccgcgagatcctccggagcctcgacctcgagaagatcgcg
gcggacctgcgccaggagatcgccacgacgacctccgagctgaagccgaagaagctgatg
aagcgcctcaagatcatcgaggccttcatccagtccggcaacaagcccgagtggatgatc
ctgacggtcgtgccggtgatcccgccggacctgcgcccgctcgtcccgctcgacggcggc
cgcttcgcgacgtcggatctcaacgatctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctcatcgagctcagggcgcccgacatcatcatccgcaacgagaagcggatg
ctgcaggaggccgtcgacgcgctgttcgacaacggccggcgcggccgcgtcatcacgggt
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgctcggtgatcgtcgtcggt
ccggagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctatgcgcggctcgacgccaagggcctctcggccacggtgaagcaggcgaag
aagctcgtcgagaaggagaagcccgaggtctgggacatcctcgacgaggtgatccgcgag
catcccgtgatgctcaaccgcgcgccgacgctgcaccgcctcggcatccaggccttcgag
ccgaccctcatcgagggcaaggccatccagctgcatccgctcgtctgcgcggcgttcaac
gccgacttcgacggtgaccagatggcggtgcacgtgcctctctcgctggaagcccagctc
gaggcgcgcgtgctgatgatgtcgacgaacaacatcctgcacccggccaacggtcagccg
atcatcgtgccgtcgcaggacatcgttctcggcctctactacctctcgatcctggccgag
ggcgagccgggcgagggcaaggtgttcgccgacatgggcgagctcgagcacgcgctcgcg
gccaaggtcgtcaccctgcactcgaagatcaagtaccgctggacgggcgtggccgaggac
ggctccacctattccaaggtctacgagacgacgccgggccgcgtgatcctgtcgcgcgtc
ctgcccaagcaccccgccgttcccttcgacgtcgtgaacaagctcatgacgaagaaggag
atctcgaacatgatcgacaccgtctaccgcaactgcgggcagaaggaatcggtcatcttc
tgcgatcgcatcatgggcctcggcttctaccacgcgttcaaggccggcatctcgttcggc
aaggacgacatggtggtgcccgagaacaagtggtcgatcgtcgacgagacgcgcgcgctc
gtgaaggactacgagcagcagtaccaggacggtctcatcacccagggcgagaagtacaac
aaggtggtcgacgcctgggccaagtgctcggatcgcctcgccggcgagatgatggcgcgc
atctcggccgtgcagaaggacgagagcggccgcgacaagccggtgaactccatctacatg
atggcccactccggcgcccgcggctcgccggcgcagatgaagcagctcgcggccatgcgc
ggcctgatggccaagccctccggcgagatcatcgagagcccgatcatctcgaacttcaag
gaaggcctcgacgtgctcgagtacttcaactcgacgcacggcgcccgcaagggccttgcc
gacacggcgctcaagacggcgaactcgggttatctcacccgccgtctcgtcgacgtggcg
caggacgcggtcatccgcgagccggactgcggcaccgacaagggcatccgcatgcgggcc
atcgtcgatgccggccagatcgtcgcctcgctcgcctcgcgcatcctcggccgcacggcg
gcggaggatctcgtggacacggacggcaaggtcatcgtgccggccggcaccatgatcgag
gaatggcacatcgagccgatcaccaccgccggcatccaggaggtgaagatccgctcggtg
ctgacctgcgaggccaagaacggcgtctgcgccacctgctacgggcgtgacctcgcgcgc
ggcacgccggtgaactacggcgaggccgtcggcgtcatcgcggcgcagtcgatcggcgag
ccgggcacgcagctcacgatgcgcacgttccacatcggcggcgccgcgcagatcgccgac
cagtccttcgtcgagtccaacttcgagggcacggtcaagatccgcaaccgcaacgtggcg
cgcaactcggacggcgacctcatcgccatgggccgcaacctcgccgtgctcatcgtgggg
ccggacgggcaggagcgggcggtgcaccgcatccagtacggcgcgcgcctcaaggtcgac
gagggcgacaccatcaagcgcggccagcgcatcgccgagtgggatccctacacccggccg
atcctgacagaggtcgacggtgtggtcggcttcgaggacctcgtcgagggtgcctcgatg
tcggagcagatcgacgagtcgaccggcatcgccaagcgcgtcgtcatcgactggcgcggc
tcggcccgcacgtcggacctccggcccgccatcgtcatccacgacgaaaacggcaagatc
gccaagctcgcccgtggcggcgaggcccgttcgctgctcgcggtcgaggccatcatcggc
gtcgacccgggggcgaaggtcaaggccggcgacgtgctcgcccgtatcccgatggagagc
gccaagacgcgcgacatcaccggcggtctgccgcgggtggcggagctgttcgaggcgcgc
cggccgaaggatgcggcgatcatcgccgagaagtccggcacgatccagttcgggcgcgac
tacaagaacaagcgccgcctgacgctgatcccgcatgacggctcggattcggtcgagtac
ctcatcccgaagggcaagcacatccaccttcaggatggcgacgtggtggaggtcggcgac
ttcatcgtcgacggcaacccggcgccgcacgacatcctcgccatcaagggcgtcgaggaa
ctggccgcctatctcgtcaacgagatccaggaggtgtaccgcctgcagggcgtgaacatc
aacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatccaggag
gcgggcgacagcgagttcctgcagggcgagcaggtcgaccggctggagatggaggaggcg
aacgagacgctggtcgccgaaggcaagaagccggcttccggcacgccggtcctgctcggc
atcaccaaggcgagcctgcagacccgctcgttcatctctgccgcctccttccaggagacg
acgcgcgtcctcaccgaggccgccgtcaacggcaagacggacacgctcgagggtctcaag
gagaacgtcatcgtcggctcgctcatcccggccggcaccggggcggtggccgcccgcctg
cgcgagatcgcgcagcgtcgcgacgagctcatcctggcgcagaaggcgaacgaatccggc
caggccgccgcggcggccgtgggcggggagttgccgccggctgcggccgagtaa
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integrated database retrieval system
