Chelatococcus sp. CO-6: AL346_03585
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Entry
AL346_03585 CDS
T04040
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chel03016
]
AL346_03585
Enzymes [BR:
chel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AL346_03585
Transfer RNA biogenesis [BR:
chel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL346_03585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALA16664
LinkDB
All DBs
Position
741405..742019
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AA seq
204 aa
AA seq
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MTIRLHIGDLPADADFGDAVAVDTETLGLVPQRDRLCLVQLSRGDGTADLVQIRPDGPRP
DNLARLLADEKVLKIFHYARFDLAVIEHYLGVMPGPVFCTKIASRLTRTYTDRHGLKDVL
RELLSVEISKQQQSSDWGASTLSEAQLAYAASDVLHLHALRDKLEALLAREGRTELARQC
FAFLPTRARLDLAGWPEVDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgcctgcacatcggtgacctgccggccgacgccgacttcggcgacgccgtg
gccgtcgacaccgaaaccctcggcctcgtgccccagcgcgaccggctgtgcctcgtgcag
ctgtcgcgcggcgacggcacggcggacctcgtccagatccgtcccgacgggccgcggccg
gacaatctcgcgcgcctcctcgcggacgagaaggtcttgaagatcttccactacgcccgc
ttcgacctcgccgtcatcgagcattatctcggcgtcatgcccggcccggtgttctgcacc
aagatcgcctcgcgtctcacccgcacctacaccgaccgccacggcctcaaggacgtgctg
cgggagctcctcagcgtcgagatctcgaagcagcagcagtcgtccgactggggcgcctcg
actttgagcgaggcccagctcgcctatgcggcctcggacgtgctgcatctccacgcattg
agggacaagctcgaggcgctgctcgcccgcgagggtcgcacggagctcgcgcgccagtgc
ttcgccttcctgccgacgcgggcgcggctcgatcttgcgggctggccggaagtcgacatt
ttcgcccattcgtga
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