Chelatococcus sp. CO-6: AL346_07840
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Entry
AL346_07840 CDS
T04040
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chel03032
]
AL346_07840
03036 Chromosome and associated proteins [BR:
chel03036
]
AL346_07840
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_07840
DNA replication proteins [BR:
chel03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AL346_07840
Chromosome and associated proteins [BR:
chel03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AL346_07840
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AL346_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ALA17335
LinkDB
All DBs
Position
1669279..1669608
Genome browser
AA seq
109 aa
AA seq
DB search
MIKSELVMRIAEQNPHLYQRDVENIVNAILEEITRALARGDRVELRGFGAFSVKQRNARV
GRNPRTGETVDVASKMIPVFKTGKEMRLRLNGSAAAPATGRKAAMSVSA
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtccgagctcgtgatgcggattgccgagcagaatccgcacctctaccagcgc
gatgtcgagaacatcgtcaatgcgatcctcgaggagatcacccgcgcgctcgcgcgcggc
gatcgggtcgagctgcgcgggttcggcgccttttcggtcaagcagcgcaatgcgcgcgtc
ggccgcaacccgcgcacgggcgagacggtcgatgttgcgtcgaagatgattcccgtcttc
aagaccggcaaggagatgcgcctgcgcctcaacggcagtgccgccgccccggcgacgggc
aggaaggctgccatgagcgtgagcgcgtga
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