Chelatococcus sp. CO-6: AL346_09115
Help
Entry
AL346_09115 CDS
T04040
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chel03016
]
AL346_09115
Enzymes [BR:
chel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AL346_09115
Transfer RNA biogenesis [BR:
chel03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AL346_09115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ALA19608
LinkDB
All DBs
Position
1939484..1940059
Genome browser
AA seq
191 aa
AA seq
DB search
MPRLFTGLEIPADIAEALARHRGGLYGARWIDVENYHITLRFVGDVDATTAADIYDSLAD
IDRPPVTVTLDMLDSFGGGRPRAIVARVRLNSALTELQADHERCVRRAGLPPEPRKFTPH
VTLARLRDASPLDVADYFAGQGAFRPLTFTADRFVLFSSRASVGGGPYIVEAAYALSRHP
YMSGRRLAAGA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtctgttcaccggcctcgaaattcccgccgacatcgccgaggcgctcgcgcgc
caccgcggcggcctctacggcgcgcgctggatcgatgtcgagaactatcacatcaccttg
cgcttcgtcggtgacgtcgacgccacgacggcggcggacatctacgattccctcgccgac
atcgaccgtccgccggtgacggtgacgctcgacatgctggattccttcggaggcggccgg
ccgcgggcgatcgtcgcgcgcgtgcggctcaactccgcgctcaccgagttgcaggccgac
cacgagcgctgcgtgcgccgcgccggcctgccgcccgagccgcgcaagttcacgccgcac
gtcaccctggcgcggctgcgcgatgcttcgccgctcgatgtcgcggattactttgccggg
cagggcgccttccggccgctgaccttcaccgccgaccgcttcgtgctgttctcctcgcgc
gcctcggtcggcggcggcccctacatcgtcgaggccgcctacgcgctatcgcgtcatccc
tacatgtcgggccggcgcctggcggccggcgcctga
DBGET
integrated database retrieval system
