Chelatococcus sp. CO-6: AL346_09870
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Entry
AL346_09870 CDS
T04040
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chel03032
]
AL346_09870
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_09870
Enzymes [BR:
chel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AL346_09870
DNA replication proteins [BR:
chel03032
]
Prokaryotic type
DNA Topoisomerases
AL346_09870
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL346_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
ALA17656
LinkDB
All DBs
Position
2096598..2099249
Genome browser
AA seq
883 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGKDYEVLASFGHIRDLPAKDGSVDPEADFSMIWELEDRGSK
RVSDIARAVKGADKLILATDPDREGEAISWHVIEALTQKKVLKDVAIERVTFNAITKDAV
LEAMRQPRQIDQALVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EREIETFVAREYWSLIALLATGAGATFEARLVGADGKKITRLDIGKGEEAEAFRKALEAA
AFRVTAVEAKPAKRHPQPPFTTSTLQQEASRKLGFAPARTMQLAQRLYEGVEIGGETVGL
ITYMRTDGVDMAPEAVAGARRVIAKEFGDAYVPGVPRKYTTKAKNAQEAHEAVRPTDLGR
LPAMVARQLDPDQARLYDLIWTRTVASQMESAVFERTTVDIEAKAAGRVLDLRATGQVVT
FDGFLKLYQEGRDDEEDEESRRLPAMKAGDALEKREIRATQHFTEPPPRYTEASLVKRME
ELGIGRPSTYAAVLAVLKERGYVEIDKKRLVPEDKGRIVTAFLESFFRRYVEYDFTADLE
EQLDRVSNNEIDWKAVLRDFWRDFIAAIDETKSLRMSEVLDALNEELGPHIFPKKADGSD
PRACPSCGTGQLSLKLGKFGSFIGCSNYPECRYTRQLAANGDGETSAAADGGPRVLGKDP
ETGLDVTLRDGRFGPYVQLGEGDKPKRQTLPKGLAPDLVDLEKALKLLSLPREVATHPES
GKPILAGIGRFGPYVQHERTYANLGKDDDVLDIGANRAIDLIITKEQGGGRRGGAADPGR
VLGEEPESGKQLSVKAGRYGPYVTDGTTNATLPKSMDKDALTLEEAIALIRAKRASGGGK
KAAAKKPAAKKAPAKKAAAKKPAEKAPAKKAAGKPTKKAAAGE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgttgtcgtcgaatctcccgccaaggcgaagacgatcaacaagtacctcggc
aaggactacgaggtcctggcctcgttcggccacatccgcgatctgccggccaaggacggc
tcggtcgaccccgaggccgatttctccatgatctgggagctggaggaccgcggctccaag
cgcgtgtcggacatcgcgagggcggtgaagggggcggacaagctcatcctcgccaccgac
ccggatcgcgagggcgaggcgatctcctggcacgtcatcgaggcgctgacgcagaagaag
gtgctgaaggacgtggccatcgagcgcgtcaccttcaacgccatcaccaaggacgcggtg
ctcgaggcgatgcgccagccgcgccagatcgaccaggccctggtcgatgcctatctcgcc
cgccgtgcgctcgactatctcgtcggcttcaatctctcgccggtgctgtggcgcaagctg
cccggcgcccgttctgccgggcgcgtccagtcggtggcgctgcgcctcgtctgcgaccgc
gagcgcgagatcgagaccttcgtggcgcgggaatactggtcgctcatcgccctcctcgcg
acgggggcgggcgcgaccttcgaggcccgcctcgtcggcgccgacggcaagaagatcacc
cggctcgacatcggcaagggcgaggaggctgaggccttcaggaaggcgctcgaagcggcg
gccttccgcgtcaccgcggtcgaggccaagccggccaagcgccacccgcagccgcccttc
accacctccaccctgcagcaggaggcctcgcgcaagctgggcttcgccccggcgcgcacc
atgcagctcgcccagcggctctacgagggcgtcgagatcggcggcgagacggttggcctc
attacctatatgcgtaccgacggcgtcgacatggccccggaggcggtcgccggcgctcgc
cgcgttatcgccaaggagttcggcgacgcctatgtgcccggagtgccgcgcaagtacacg
accaaggccaagaacgcgcaggaggcgcacgaggctgtgcgcccgaccgatctcggccgc
ctgccggccatggtggcgcgccagctcgatcccgatcaggcccggctctacgacctcatc
tggacgcgcaccgtggcgagccagatggaatcggccgtcttcgagcgcaccacggtcgat
atcgaggcgaaggccgccggccgcgtgctcgacctgcgcgccaccggccaggtggtgacc
ttcgacggcttcctgaagctctatcaggaaggccgcgacgacgaggaggacgaggagagc
cgccgcctgcccgccatgaaggccggcgatgccctcgagaagcgcgagattcgcgcgacg
cagcacttcaccgagccgccgccgcgctacaccgaggcgagcctcgtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcggccgtgctcgccgtgctcaaggagcgc
ggctatgtcgagatcgacaagaagcgcctcgtgcccgaggacaagggccgcatcgtcacg
gccttcctcgagagcttcttccgccgctatgtcgaatacgacttcacggccgacctcgag
gagcagctcgaccgcgtctccaacaacgagatcgactggaaggcggtgctgcgcgacttc
tggcgcgacttcatcgccgccatcgacgagacgaagagcctgcgcatgagcgaggtgctc
gacgccctcaacgaggagctcgggccgcatatcttcccgaagaaggcggacggcagcgat
ccgcgcgcctgcccgagctgcggcaccggtcaattgtcgctgaagctcggcaagttcggc
tccttcatcggctgctccaactatccggagtgccgctacacgcgccagctcgcggcgaac
ggcgatggtgagacgagcgctgccgccgacggcggcccgcgcgtcctcggcaaggaccct
gagacggggctcgacgtcacgctgcgcgacgggcgcttcggtccctatgtgcagctcggc
gagggcgacaagcccaagcgccagaccctgcccaagggccttgcgccggatctcgtcgac
ctcgaaaaggcattgaagctgctgtcgctgccgcgcgaggtcgcgacgcatcccgagagc
ggcaagccgatcctcgccggcatcggtcgcttcgggccttatgtccagcacgagagaacc
tacgccaatctcggcaaggacgacgacgtgctcgacatcggtgccaaccgggccatcgac
ctgatcatcacgaaggagcagggcggcggacgccggggcggcgcggccgatccgggccgg
gtgctgggcgaagagccggagagcggcaagcagctcagcgtcaaggccggtcgctatggt
ccctacgtcaccgacggcacgaccaacgccaccctgcccaagagcatggacaaggacgcg
ctgaccctggaggaggccatcgccctcatccgtgccaagcgcgcctccggcggtggcaag
aaggcagcggcgaaaaagccggccgccaagaaggcccctgcgaagaaagctgccgcaaag
aagccggctgaaaaggcgcccgctaaaaaggcagccggcaaaccaacgaagaaggcggca
gcgggagaatag
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