Chelatococcus sp. CO-6: AL346_17645
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Entry
AL346_17645 CDS
T04040
Name
(GenBank) beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
chel
Chelatococcus sp. CO-6
Pathway
chel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL346_17645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chel03019
]
AL346_17645
Messenger RNA biogenesis [BR:
chel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AL346_17645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RNase_J_C
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALA18896
LinkDB
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Position
3759345..3761018
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AA seq
557 aa
AA seq
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MASRDDDGLVFVALGGLGEIGMNAGLYGFGPARRRKWLLVDCGIAFAGEDVPGVDLIFPD
IRFLEEERDNLVGIVITHAHEDHIGGLAELWPRLGAPVVCTPFAAGLLEVRRLGEPGAPK
IPLTVVEQGGRVTLGPFDIEFVAVGHSIPESNALAIRTPLGTVVHTGDWKLDPHPGVGRP
TDEKRLTEIGDEGVLALVCDSTNVLRDGISPSEADVAKTLVEVIREAPERVAVTTFASNV
ARLRAVAEAAAACDREVVVFGRAMDRVVDVATERGYLAGLPPFRSAETFGYLPRNKVVAL
LTGSQGEPRAALARVANDEHPDIALSAGDRVVFSSRTIPGNEKAVGRIINNLVTRGIEVV
TDRDALVHVSGHPRRGELAAMYRWVRPKVLVPAHGEALHLTEQAKFARAEGIQSVVRAMN
GEMVLLAPGKPAVVDDVPVGRLYKDGMIVVSAGEATIGERRKLAFAGVVSVAIALDAKGE
IVGEAQVEVTGLPPATREGEPMLELVADAVADVLDGLPKARRRDPDAVANAVERAVRAEV
RHAWGKKPTCHVHVIVV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgcgatgacgacggcctcgtattcgtagcgctcggcggtctcggcgagatc
ggcatgaacgccggtctctacggcttcgggccggcgcgccggcgcaagtggctgctcgtc
gactgcggcatcgccttcgcgggcgaggacgtgccgggcgtcgatctcatcttccccgac
atccgcttcctcgaggaggagcgggacaacctcgtcggcatcgtcatcacccatgcgcac
gaggaccatatcggcggcctcgccgagctgtggccgcgcctcggcgcgcccgtggtgtgc
acgcccttcgcggcggggctactggaggtccgtcgtctcggcgagcccggcgcgcccaag
atcccgctcaccgtggtggagcagggcggtcgcgtcaccctcgggcccttcgacatcgaa
ttcgtcgctgtcggccattcgatcccggaatcgaatgcgctcgccatccgcacgccgctg
ggcaccgtcgtccacaccggcgactggaagctcgacccgcaccccggcgtcggccggccg
acggacgagaagcgcctcaccgagatcggcgacgagggcgtgctggcgctcgtctgcgat
tcgaccaacgtcctcagggatggcatcagccccagcgaggctgatgtcgccaagaccctg
gtcgaagtcatccgggaggcgccggagcgtgtggcggtgacgaccttcgcctcgaatgtc
gcgcgtctgcgcgccgtggccgaggcggcggcggcctgcgatcgcgaggtcgtcgtcttc
ggccgggcgatggatcgtgtcgtcgacgtcgcgacggagcgcggctatctcgccggcttg
ccgccgttccgctccgccgagaccttcggctacctgccgcgcaacaaggtggtcgcgttg
ctcaccggcagccagggcgagccgcgggcggcgctcgcccgcgtcgcgaacgacgagcat
cccgacatcgcgctctccgccggtgaccgcgtcgtcttctcctcgcgcaccattccgggc
aacgagaaggcggtcggccgcatcatcaataatctcgtcacgcgcggcatcgaggtcgtc
accgaccgggacgcgctcgtccacgtctccggccatccccgccgcggcgagctcgccgcc
atgtaccgctgggtgcggccgaaggtgctcgtgccggcgcacggcgaggccctgcacctc
acggaacaggcgaaattcgcccgcgccgagggcatccagtccgtggtgcgggccatgaac
ggcgagatggttctgctcgcgcccggcaagcctgccgtcgtggacgacgtgcccgtcggc
cgcctctacaaggacgggatgatcgtcgtcagcgccggcgaggccaccatcggcgagcgg
cgcaagctcgccttcgccggcgtcgtctccgtcgccatcgccctcgacgccaagggcgag
atcgtcggcgaggcgcaggtggaggtcaccggcctgccgccggcgacgcgcgagggcgag
ccgatgctcgagctcgtcgccgatgcggtggcggacgtgctcgacgggctgcccaaggcg
cgccggcgcgaccccgatgcggtggcgaatgccgtcgagcgcgcggtgcgggcggaagtg
cgccatgcctggggcaaaaagccaacgtgccacgtgcatgtgatcgtcgtatga
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