Chelatococcus sp. CO-6: AL346_17720
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Entry
AL346_17720 CDS
T04040
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chel
Chelatococcus sp. CO-6
Pathway
chel03030
DNA replication
chel03430
Mismatch repair
chel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL346_17720
03430 Mismatch repair
AL346_17720
03440 Homologous recombination
AL346_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chel03032
]
AL346_17720
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_17720
Enzymes [BR:
chel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL346_17720
DNA replication proteins [BR:
chel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL346_17720
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL346_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF1707
DUF655
T2SSK
HROB
McdB_C
Motif
Other DBs
NCBI-ProteinID:
ALA18908
LinkDB
All DBs
Position
3774836..3778306
Genome browser
AA seq
1156 aa
AA seq
DB search
MGSILSSVGFVHLHVHSSYSLLESALTVTTLGKLAAADKMPALALTDTNNLFGGLEFSEK
LKGLGIQPIAGVQLSVAFEEQDPAQRSVHARDFPHIVLLAQDEEGYGNLMRLTSWTYLDT
DPSEKPHVPLDRVLANSRGLIALTGGFGGPLDQALREGRSESAEARLKALRGAFDGRLYV
ELQRHGLPEQAAAEPELLRLAYDLGLPIVATNEPFFAKQDDYEAHDALLAIAAGRLMSDE
NRRRVTPQHDFKTRAQMADLFSDLPEALSSSVEIAMRCAYRIRTRKPILPRFDAGTEGAE
SDEGAELRRQAVEGLKRRLDAHGPAPDLTVADYEERLDFELSVIERMKYPGYFLIVSDFI
KWAKAHDIPVGPGRGSGAGSLVAYALTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQ
DRREEVIGYVQKRYGEDKVAQIITFGTLLARGVMRDVGRVLEMPYGQVDKLTKLVPQNPA
NPVTLKKAIEDEPRLQAAAEEEPVVGRMLAIAEKLEGLHRHASTHAAGIVIGDRPLEELV
PLYRDPRSGMRVTQFNMKWVEQAGLVKFDFLGLKTLTVLTTAVNFVRQRGIDLDLSRIPL
DDRTTFELLGRGETVGVFQVESAGMRKALVDMRADRLEDLIALVALYRPGPMANIPVYCD
RKHGRGEASEKWYLHPKLEPILKETFGIIIYQEQVMQVAQALSGYSLGEADLLRRAMGKK
IKAEMDAQRVRFVEGALKSGLTKDLADEIFDLLAKFADYGFNKSHAAAYALVAYQTGYLK
ANYTVEFLAASMALDMDNTDKLSEFRREAERLGIRVEPPSINRSGVSFEVDHDGVGPGII
RYALAATKGVGRQAVESIIAARGDKPFTSLSDFASRINPRLVNKRTLEALIAAGAFDELE
PDRARATAAIDAMMALASRMAAAATDGQADIFGGLAAGPEPLRIPPYEPWVPAVRLQKEY
DAVGFFLSGHPLDGYEEMLERLRVQRWVDFAKAVKAGATMGRLAATVLDRTERRTKSGSK
MGIVMLSDQTGHFEAIVFSEGLQRFRDLLEPGRAVVLVVQASVEGEDVRARIQSVEPLDE
AIAQHQKGMRIYVRDEVPLASVSERLKQRGEGEVSMVLILDNAQEVELRLPGRYLATPQI
AGALRAVPGVVHVELQ
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcatcctgagcagcgtcggcttcgtgcatcttcacgtgcactcgtcctattcg
ctgctcgagagcgccctgaccgtcacgaccctcggcaagctcgccgccgccgacaagatg
ccggcgcttgccctgaccgacaccaacaatctcttcggcggactggagttctcggagaag
ctgaagggcctcggcatccagcccatcgccggcgtgcagctgtcggtcgccttcgaggag
caggacccggcccagcgcagcgtccacgcccgcgattttccccacatcgtccttctggcc
caggacgaggaggggtacggcaacctgatgcggctcacgagctggacctatctcgatacc
gatcccagcgagaaaccgcatgtgccgctcgaccgggtcctcgccaacagccgaggcctc
atcgcgctgaccggcggcttcggcggaccgctcgaccaggccctgcgcgagggacggtcc
gaaagtgccgaggcgcggctcaaggccttgcgcggcgccttcgacgggcggctctatgtg
gaattgcagcgccacggcctgcccgagcaggctgccgccgagccggagctgctgcggctc
gcctatgacctcggcctgccgatcgtcgcgaccaacgagcccttcttcgccaaacaggac
gactacgaggcccatgacgcgctgctggcgatcgcggccgggcggctcatgtcggacgag
aaccggcgccgcgtcacgccgcagcacgacttcaagacgcgcgcgcaaatggctgatctg
ttttcggatttgccggaggcgctgtcgtcgagcgtcgagattgccatgcgctgcgcctac
cgcatccgcacgcgcaagccgatcctgccccggttcgatgccggcacagagggcgccgag
agcgacgagggtgcggagctgcgccgtcaggcggtggaggggctgaagcgccgcctcgat
gcgcacggcccggcgcccgacctgacggtggcggattacgaggagcggctcgacttcgag
ctctcggtcatcgagcgcatgaagtatcccggctacttcctcatcgtgtcggacttcatc
aaatgggcgaaagcgcacgacatccccgtcgggccggggcgcggctcgggcgccggctcg
ctcgtcgcctatgcactcaccattaccgacctcgatccgctgcgcttcggcctgctgttc
gagcgcttcctcaaccccgagcgcgtgtcgatgcctgacttcgacatcgacttctgccag
gaccggcgagaggaggtgatcggctacgtccagaagcgctacggcgaggacaaggtcgcg
cagatcatcaccttcggcaccttgctcgcccgcggcgtgatgcgtgacgtcggccgcgtg
ctggagatgccctacggccaggtcgacaagctcaccaagctcgtgccgcagaatccggcc
aatccggtgacgctcaagaaggccatcgaggacgagccgcgcctgcaggctgccgccgag
gaggagcccgtcgtcggccgcatgctggccatcgccgagaagctggaaggcctgcaccgg
cacgcctcgacccatgccgccggcatcgtcatcggcgaccggccgctcgaggagctggtg
ccgctctatcgcgatccgcgctcgggcatgcgcgtcacccagttcaacatgaagtgggtg
gagcaggccggcctcgtgaagttcgacttcctcggcctcaagacgctgacggtgctgacg
acggcggtcaatttcgtgcgccagcggggtattgatctcgacctgtcgcgcatcccgctc
gacgaccgcaccaccttcgagctcctcggccgcggcgagacggtcggcgtgttccaggtg
gaaagtgcgggcatgcgcaaggccctcgtcgacatgcgcgccgaccggctggaggacctc
atcgccctcgtcgccctctaccggccgggcccgatggccaacatcccggtctattgcgac
cgcaagcacgggcgcggcgaagcctccgagaaatggtacctgcacccgaagctggagccg
atcctcaaggagaccttcggcatcatcatctaccaggagcaggtgatgcaggtggcgcag
gcgctgtcgggctattcgctcggcgaggccgatctcctgcgccgcgccatgggcaagaag
atcaaggcggagatggacgcccagcgcgtgcgcttcgtcgagggcgcgctgaaaagcggc
ctgacgaaagaccttgccgacgagatcttcgacctgctcgcgaagttcgccgactacggc
ttcaacaagagccacgcggcggcctatgcgctggtcgcctaccagacgggctatctcaag
gccaactacaccgtcgagttcctggccgcctccatggcgctcgacatggacaacacggac
aagctctcggaattccgccgcgaggccgagcgtctcggcatccgtgtcgagccgccgtcg
atcaaccgctcgggcgtctccttcgaggtcgaccacgacggcgtgggccccggcatcatc
cgctacgcgctcgccgcgaccaagggcgtcgggcgtcaggcggttgaaagcatcattgca
gcacgcggcgacaagcctttcacaagtctttctgatttcgcttcgcgcatcaatccgcgc
ctcgtcaacaagcgcaccctggaggcgctgatcgcggcaggcgcgttcgatgagctggag
cccgaccgggcgcgcgcgacggcggcgatcgacgccatgatggcgctcgcatcgcgcatg
gcggcggcggccacggacggtcaggcggacatcttcggcggccttgccgccggccccgag
ccgctgcgcatcccgccctacgagccgtgggtgccggccgtgcggctgcagaaggaatat
gacgcggtcggcttcttcctgtcgggccacccgctcgacgggtacgaagagatgctcgag
cggctgcgcgtgcagcgctgggtggatttcgccaaggcggtgaaggccggcgcgaccatg
ggccggctggcggcaacggtgctcgaccggaccgagcggcgcaccaagagcggcagcaag
atgggcatcgtcatgctctcggaccagaccgggcatttcgaggccatcgtcttctcggag
gggctgcagcgcttccgcgatctgctggagcccgggcgggcggtggtgctcgtggtgcag
gcctcggtcgagggggaggacgtgcgcgcccgcatccagtccgtcgagccgctcgacgag
gccatcgcccagcatcagaagggcatgcgcatctatgtgcgcgacgaagttccgctcgcc
agcgtcagcgagcgcctgaagcagcgcggcgagggcgaggtgtcgatggtgctcatcctc
gacaatgcgcaggaggtggagctgcgcctgcccgggcgctatctcgccaccccgcagatc
gccggcgccctgcgcgccgtgccgggcgtggtgcacgtcgagctgcaatag
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