Chelatococcus sp. CO-6: AL346_19395
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Entry
AL346_19395 CDS
T04040
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chel03032
]
AL346_19395
03400 DNA repair and recombination proteins [BR:
chel03400
]
AL346_19395
Enzymes [BR:
chel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AL346_19395
DNA replication proteins [BR:
chel03032
]
Prokaryotic type
DNA Topoisomerases
AL346_19395
DNA repair and recombination proteins [BR:
chel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL346_19395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALA19181
LinkDB
All DBs
Position
complement(4150169..4151245)
Genome browser
AA seq
358 aa
AA seq
DB search
MLAHAQTASVLPPDPPASAEAADLLYINDGEPGIRRRRAGRGFFYVDAAGRRVEDEATMA
RIRSLAIPPAWTDVWIAPTSRGHVQATGRDQRGRKQYRYHPLWTACRDEVKYATLAAFAR
ALPRMRRRVRRDLALKGVPRERVLAAVVWLLDRAMIRIGNETYRRQNKSFGLTTLRARHV
AVRGASLRFAFRGKSGKEWNLRIEDRRIAKVIRSVQDLPGQHLFQYRDEDGSRRPVASQD
VNDYIRAASGGEPFSSKQFRTWGGTVLAARLLSGTPLLETKRERARSLNEVIDAVAAQLG
NTRAICRRCYIHPGLISSWEEGRLAEELADVRARLGRPPAGLARNEAVVLAWLEREGG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccatgcgcaaacggcttccgtcctcccgcccgatccgcccgccagcgcggag
gccgccgatcttctctacatcaacgacggggagccgggcatccggcgcaggcgcgccggg
cgcggcttcttctatgtcgatgccgccggccggcgtgtcgaggacgaggcgacgatggcg
cgcatccgcagcctcgcgatcccgcccgcatggaccgacgtgtggatcgccccgacgagc
cgcggccatgtccaggcgacggggcgggaccagcgcggccgcaagcaatatcgctatcat
ccgctctggaccgcctgccgcgacgaggtgaaatacgcgacgctcgccgccttcgcccgc
gccctgccgcggatgcgccggcgggtgcggcgcgacctcgcgctgaagggggtgccgcgc
gagcgggtgctggccgcagtcgtatggctgctcgaccgcgccatgatcaggatcggcaac
gagacctatcggcgccagaacaagagcttcggcctgaccacgctgcgggcccgccatgtc
gcggtgcgcggcgcgtcgctgcgcttcgccttccgcggcaagtccggcaaggaatggaac
cttcggatcgaggaccggcgcatcgccaaggtgatccgcagcgtccaggatctgcccggg
cagcatctcttccagtatcgcgacgaggacggcagccgccgcccggtcgcctcccaggac
gtgaacgactacatccgcgccgcgagcggcggcgagcccttcagctccaagcagttccgc
acatggggcggtacggtgctggctgcgcgcctcctctccgggacgccgctgctggaaacg
aaacgtgaaagggcgcggagcctcaacgaggtgatcgacgcggtggctgcccagctcggc
aacacacgcgcgatctgccggcgctgctacatccatcccgggctgatcagctcgtgggag
gagggccggctcgccgaggaactcgccgatgtgcgcgccaggctcggccgcccgccggcc
gggcttgcccgcaacgaggcggtggttctcgcctggctcgagcgggaagggggatag
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