Candidatus Cardinium hertigii: DK880_00147
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Entry
DK880_00147 CDS
T05479
Symbol
rluB_2
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cher
Candidatus Cardinium hertigii
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cher03009
]
DK880_00147 (rluB_2)
Enzymes [BR:
cher01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DK880_00147 (rluB_2)
Ribosome biogenesis [BR:
cher03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DK880_00147 (rluB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AWN81483
UniProt:
A0A2Z3L772
LinkDB
All DBs
Position
166346..167101
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AA seq
251 aa
AA seq
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MNIERSLLFMSACSLPLIRLNKFISNAGICARRAADRLIASGAITVNGHPVRTVGTKITL
SAVVAYKGTILQAAKPTYILLNKPKGYVSTLQDPEGRKTVVDLISKRYCAERVYPVGRLD
YDTMGLLLLTNDGALAQQLAHPSSQVQKYYHVILDRAIQADHYHSIQQGILLEDGFTKVD
TLTIAVDNPRQLNVALHMGKNRIVRRIFEHFGYTIQKLDRIGYAHLTKKNIPRGKWIFLD
LQAVAKLKSLS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgaaagaagtttactgtttatgtcagcttgttctctcccgcttatacgttta
aataaatttatcagtaatgcggggatatgtgctagaagagcagctgatcgattaattgca
tcaggtgctattaccgtaaatgggcatcccgtacgaacagtaggcacaaagataacgctt
tctgcagtggtggcctacaagggtactattttacaggcggcaaagccaacctatatacta
ttgaataagccaaagggctatgtaagcacattacaagatccggaaggccgtaagacagtg
gtggatctcatcagcaagcgctattgtgctgaacgggtttatcctgttggtcgattagat
tatgacacaatgggcttgcttttacttaccaacgatggggcactggcccaacagctggca
cacccttccagccaagtgcaaaaatattaccatgtaatattggatagggcgatacaagct
gatcactaccatagcattcaacagggtatcctattagaggatggctttactaaagtagat
acactaaccatagcagtagataaccctcgtcaactaaacgtagcattacatatgggcaaa
aaccgcattgtacgaagaatttttgaacattttggttatactattcaaaaattggacaga
ataggatatgcccaccttactaaaaaaaacataccacgtggtaaatggatttttctggat
cttcaagcagttgctaagcttaaaagcttatcttaa
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