Candidatus Cardinium hertigii: DK880_00378
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Entry
DK880_00378 CDS
T05479
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cher
Candidatus Cardinium hertigii
Pathway
cher02024
Quorum sensing
cher03060
Protein export
cher03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DK880_00378 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DK880_00378 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK880_00378 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cher02044
]
DK880_00378 (ffh)
Enzymes [BR:
cher01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DK880_00378 (ffh)
Secretion system [BR:
cher02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DK880_00378 (ffh)
Eukaryotic Sec-SRP protein
DK880_00378 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
nSTAND3
AAA_16
NPHP3_N
cobW
APS_kinase
SLFN-g3_helicase
ATPase
AAA_28
ATP_bind_1
AAA_30
KAP_NTPase
AAA_18
AAA_14
NTPase_1
AAA_33
ParA
ResIII
NACHT
GTP_EFTU
YqeC
Stv
AAA_17
KTI12
Motif
Other DBs
NCBI-ProteinID:
AWN81706
UniProt:
A0A2Z3LCX3
LinkDB
All DBs
Position
complement(487089..488411)
Genome browser
AA seq
440 aa
AA seq
DB search
MFEHLSKNLEKAIKSLKGQNRITDINIAATVKEIRRSLVQADVHYKVAKQVTDAIKQKAI
GTDILTAVSPGQLFTKLVQDALTDLMGGKHAEVNLTGNPAIILVAGLQGAGKTTLAGKLA
YYYKKKNKTCCLVACDVYRPAAAEQLKQLGEQLSISVYSDPMAKDPVIIAQNALKEAKQQ
AVELVIIDTAGRLAIDEKMMQELQLLKKTLNPSETLFVVDAMTGQDAVATAQTFHERLHF
DGVVLTKLDGDSRGGAALSIRNVVQKPIKFISTGEKMQDLDLFHPDRMASRILGMGDVIS
LVERAEQIYTEEQQRKLSQKIRSNQFNLEDLVHQVQQIKKMGNIKEMLAMLPVMGKTLQD
FPLDEGLFGNVEVIIQSMTPKERQQPDSIDQQRKERIARGSGTSIQAVNQLLKNFNMLCK
TMKKIGKEGPKFTLFGASKK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcatcttagtaaaaatttagaaaaagctattaaatctttaaaggggcagaac
cgtattacggacatcaatattgctgctaccgtcaaagagattaggaggagtcttgtacag
gcagatgtgcattataaagtagccaagcaggtaacagatgcgatcaagcaaaaggccatt
ggtactgatattcttactgctgtatcaccaggacagctctttaccaagttggtacaagat
gctttaaccgatttaatgggaggtaagcatgccgaggtaaatcttacggggaatcccgct
attatattggtagcaggtttacaaggtgctggtaaaaccactttagccggtaagttagct
tactattacaaaaagaaaaacaaaacctgttgtttggtagcctgtgatgtgtatagacct
gcagcggctgagcaattaaagcagctaggggagcagttgtccattagcgtatacagtgat
ccaatggctaaggatccggtaattattgcacagaatgcgctgaaggaggccaagcagcaa
gcagtagagcttgtcattatagatacagctgggcgtttggctatagatgagaaaatgatg
caggagttgcaactattaaaaaaaacgttgaacccttccgaaacccttttcgtagtagat
gccatgacaggtcaagatgcagttgccactgcgcaaacttttcatgaaagacttcatttt
gatggcgtggtactcacaaaattagatggagatagccgtggtggtgcagcactttcgatt
cgcaatgttgtacagaagccgattaaattcattagtacaggggagaagatgcaagattta
gatctgttccatccagatcgtatggccagtcgaattttaggcatgggagatgtaatttct
ctggtggaacgtgcagaacagatatataccgaggagcagcagcgtaagttaagtcaaaaa
ataaggagcaatcaatttaatttagaggacttagtgcatcaagtgcaacagataaaaaaa
atgggtaatataaaagaaatgcttgctatgttacctgttatgggtaaaacgcttcaggac
tttccattggatgagggtctatttggaaatgtagaggtcattattcaatccatgacccct
aaagaaagacagcaaccagatagtatagatcaacagcgtaaggaacgtattgcacgagga
agtggaacttctatacaagcagttaaccaattgcttaaaaattttaatatgctctgtaag
acaatgaaaaaaataggtaaagaaggccccaaatttactttatttggcgcttctaaaaag
taa
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