Candidatus Cardinium hertigii: DK880_00550
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Entry
DK880_00550 CDS
T05479
Symbol
msbA_2
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cher
Candidatus Cardinium hertigii
Pathway
cher02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DK880_00550 (msbA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cher02000
]
DK880_00550 (msbA_2)
Enzymes [BR:
cher01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DK880_00550 (msbA_2)
Transporters [BR:
cher02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DK880_00550 (msbA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_25
nSTAND1
AAA_22
MMR_HSR1
ATP-synt_ab
DUF87
AAA_28
AAA_23
NACHT
MeaB
AAA_15
AAA_7
AAA_30
AAA_18
Zeta_toxin
DUF6079
Motif
Other DBs
NCBI-ProteinID:
AWN81868
UniProt:
A0A2Z3L8C4
LinkDB
All DBs
Position
complement(672942..674783)
Genome browser
AA seq
613 aa
AA seq
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MRTYARILSYTGSLKRQAFCYFMATFLSIFFGLITYSLVIPLLKVLFNQEELNTLLVDNP
LFPKWQMSIDYLKCLFDYFFIQTIISYGKIYALGLLSLLFMVSTILNGFFRYIADIVMAK
VRIKVVYRLRLALFRKMLTFPLQRFTDKKQGDLMACITADIQEIDNAVADTLRLCCKEPT
QLFCYIALLFYMSFRLSLFTLLWLPVAGWIIAKIIKQLRKWSDRTQQSLGDLMHLIEAMV
SSIRIIKIFGAQNYAIQQFKKESRLYARINRSIACKEYMTAPISESLSVAAISIILVYGG
YLIFIDKHALSPSTFIAYFIICTQTLIPIKMMARSIGHIQRGLAAGRRALHLLDEKTEWS
RPLLGGITYTTFKHAIAFNNVSFAYSTKKAVLANINFTIQRGETVAIVGASGSGKSTLLS
LLSGLYQPSNGTITIDNFSITQLSNNTLPRLMGVVTQESILFHDTIYNNIVFNRPGITRS
AVIGAAQIACAHPFIMELPQGYDTVIGEQGGKLSGGQKQCICIARAVLGNPPILVLDEAT
SALDRVSERAVQSGLQSFMQHRTAIIVAHRLSSIYHVDRIIVLDQGKIVEEGTHATLLAQ
EGIYKRLFHLEQP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgtatgccagaatcttaagttatacaggatccttgaaacggcaagccttctgt
tattttatggccacttttctatccattttctttggcttaattacctatagtttggttatt
cctttattaaaagtactttttaatcaagaagaattaaataccctattggtagataatcca
ttattcccaaaatggcaaatgagcatagactacctcaagtgtttgtttgattatttcttt
atacaaacaattataagttatggaaaaatatatgcccttggtttattatcccttttattc
atggtttctaccattttaaatggtttctttaggtatatagcagatattgttatggctaag
gtgcgcattaaggtagtttaccgtttacggttggccctttttagaaaaatgttaaccttt
cctttacagcgctttacagataaaaagcagggagacttaatggcatgtattactgcggat
atccaggaaatagataatgctgtagccgatacattgcgtttgtgctgcaaagagcccacg
cagcttttttgttacattgcgctcctcttttacatgtctttccgattaagtctttttact
ttattgtggttgcccgttgcggggtggattattgctaagattataaaacagttgcgcaag
tggtcagatagaacgcagcaatcattaggagatctgatgcatttgattgaagcgatggta
agtagtatccgcattataaagatttttggtgcacaaaattatgcgattcagcaatttaaa
aaagaaagcaggctttatgcacgcatcaatagatccatagcatgcaaagagtatatgaca
gcacccatatcagaatcattaagcgtagcagccatttccattatacttgtttatggagga
taccttatttttatagataagcatgccttaagtcccagtacttttattgcttattttatc
atttgcacgcaaacccttataccgatcaagatgatggcacgttccattggtcatattcag
cgagggttagctgctggcaggcgtgccttgcatttattggatgaaaaaacagaatggtca
aggccattgctgggcggcataacctataccacttttaaacatgccatagcttttaacaac
gtttcttttgcttatagtaccaagaaagcagtattagccaatatcaattttaccattcaa
agaggagaaacagtagccatagtaggggcttctggttcaggcaaatctacccttttatct
cttttatctggcctgtatcagcccagtaatgggaccattaccatagacaatttttctatt
acacagcttagcaataacaccttaccccgtttaatgggggttgtaacgcaggaatctatt
ttgtttcatgatacgatttataacaatattgtttttaataggccagggattacgcgatca
gcagttataggggctgctcagatagcttgtgcccatcctttcattatggagttgccccaa
ggctatgatacagtaattggcgagcaaggtggtaagctatctggtggtcaaaagcaatgt
atttgcattgctagggctgtattagggaatccgcccattcttgtcttagatgaagcaacc
tctgccttggatagggtttctgagagagccgtacaatcaggtcttcaatcgtttatgcag
cataggacggccattattgtagcgcatcggctaagtagtatctaccatgtggataggatc
atagttttagaccaagggaaaatagtagaggaaggaacacatgctacgctcttggctcaa
gagggtatttataaaagattatttcatttggaacaaccgtag
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