Candidatus Cardinium hertigii: DK880_00564
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Entry
DK880_00564 CDS
T05479
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cher
Candidatus Cardinium hertigii
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DK880_00564 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cher03019
]
DK880_00564 (rnc)
03009 Ribosome biogenesis [BR:
cher03009
]
DK880_00564 (rnc)
03036 Chromosome and associated proteins [BR:
cher03036
]
DK880_00564 (rnc)
Enzymes [BR:
cher01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DK880_00564 (rnc)
Messenger RNA biogenesis [BR:
cher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK880_00564 (rnc)
Ribosome biogenesis [BR:
cher03009
]
Eukaryotic type
90S particles
RNase
DK880_00564 (rnc)
Prokaryotic type
rRNA processing factors
DK880_00564 (rnc)
Chromosome and associated proteins [BR:
cher03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DK880_00564 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AWN81880
UniProt:
A0A2Z3LIJ7
LinkDB
All DBs
Position
complement(691966..692667)
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AA seq
233 aa
AA seq
DB search
MWHDSATRQFIATVRAITGGVPLNLALYRIALQHSSLKEGHTSNERLEFLGDALLSSIVA
TYLFKKFPLKGEGFLTDIRSRLVNRDALNTLARKMHLDKLLQYDEILVHKGNSKYIYGNA
LEALIGAVYLDHGYAYCEQFVLERLIGNYISLEDLIARDTNFKSQIVEWAHKQRFTVRFK
TTLEAAHLFTAQVLIDEKVFGEGKGRTKKCAEQSAAQQALQQVQSFTEENAPQ
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatgattctgccactaggcagttcattgctacggtaagagctattacaggtggt
gtacctttaaatcttgctttgtataggatagccctgcagcatagttcgctcaaggaagga
catacgtccaacgaacgacttgaatttttaggagatgccttgctgtcttctattgtagca
acttatctttttaagaaatttcccttgaagggagaaggttttttaacggatattcgttca
agactggtgaatagggatgctttaaatacactggcccgtaaaatgcacctagataagcta
ttacagtatgatgaaatcctcgtacacaaaggtaatagtaaatatatttatgggaatgca
ttggaagcattgattggggctgtttacttagaccatgggtatgcttattgcgaacaattt
gtgctggaacgccttataggaaactatataagtttagaggatttaatcgcaagggatacc
aattttaaaagtcaaattgtggagtgggctcataagcaacgttttactgtacgttttaaa
acaaccctagaggctgcccatctgtttacagcccaagtacttatagatgaaaaggtattt
ggagaggggaaaggcaggacgaaaaaatgcgcagaacaatccgctgcgcagcaagcgcta
cagcaagtccaatcttttacagaagaaaatgcgccccagtag
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