Candidatus Cardinium hertigii: DK880_00646
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Entry
DK880_00646 CDS
T05479
Symbol
hbpA
Name
(GenBank) Heme-binding protein A
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cher
Candidatus Cardinium hertigii
Pathway
cher02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cher00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK880_00646 (hbpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cher02000
]
DK880_00646 (hbpA)
Transporters [BR:
cher02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DK880_00646 (hbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AWN81960
UniProt:
A0A2Z3LIT0
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Position
773599..775347
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AA seq
582 aa
AA seq
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MSRRIILYLVAVGVFVCVYYRAYRSHKALPIGGAVVFHNVAWCSINGIDPLRSKNITHNQ
VVRKIYEGLYSYHPFKKPLEIVPNLAEALPSISPDRRIYTFKIKKGILFQDDACFPNGKG
REVTAADFVFSFKRMVDPNHEVLYIDLIQGKIKGLDRWRQQAVVDYAQEVEGLQAVDDYT
LQITLIAPWSGFLNFLTMPISFVVAREAVDYYGPEFINHPVGTGPFKLEGVFNPQAAKIE
FVKNPTFRKKLFPDEAVHFDPSMQAYVGRQLPLVDRIVTCLFPKKDTCKVDLNRVDNSPF
ALKFVKDGKVGPSLAERGLVLYQACSSNTELFIFNNSHPLFARNSYLRQAMSMAFDREMY
NRTFYHNAAKIAQSLVPPVLMKDRLYSAYKRTLKNPYAYDLRRAKQYLAKAGFPAGKGLP
EITLDTSTGEFFTDRAYFFARCMAKIGIRVRVIANVCSELDRKSENQATMMHMNAWVADD
IDPLSFLQVVRTKNLIGLYYENPTFNRLFDQAETIIDKRERAGIFIKLSRMVAEEVPVIG
AVHAPIQFLHQKWVKNVFYSGIEQELDQYIAVDMAEKSKAAS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacggatcatattgtatctagtggctgttggggtatttgtttgtgtttactat
cgtgcgtataggtctcataaggcattaccgatagggggggctgttgtattccataatgta
gcgtggtgttccattaatggtatcgatccattgcgttccaaaaatattactcataaccag
gttgttagaaaaatttatgaagggttatatagttatcatccgtttaaaaagccgcttgag
atcgtgcccaatttagcagaggctttgccttctatttctccagatagaagaatatatacg
tttaaaattaagaaaggtattttatttcaggatgacgcttgcttcccaaatgggaaaggg
cgtgaagttacagcagctgattttgttttttccttcaagaggatggtagaccctaaccat
gaggtgctgtatattgatctgatacagggcaaaataaaaggactggataggtggcgacaa
caagctgttgtagattatgcacaagaggtagaagggctacaagcagtagatgattatacg
cttcagataacccttatagcgccctggagtggttttttaaattttttaaccatgccgatt
tcgtttgtggtggcacgggaagctgttgattactatggtcctgaatttattaatcatcct
gtagggacaggtccttttaagttagagggggtatttaatccacaagcagcaaaaatagaa
tttgttaaaaatcctacttttagaaaaaaattgttccctgatgaagcggttcactttgat
ccttctatgcaggcctatgtgggaaggcagttacctctggtagataggatcgttacctgc
ttatttccaaaaaaagatacgtgtaaggttgatttgaatagagtagacaattctcccttt
gcgttaaagtttgttaaagatggaaaagtggggccatcgttagccgaaagaggactggta
ttgtatcaagcatgttcttctaatacagaactttttatttttaataacagccatccgctt
tttgctcgaaattcctacttgaggcaagcgatgtctatggcctttgatagggagatgtat
aatagaaccttttaccacaatgcagccaaaatagctcaatccttagtacctcctgtttta
atgaaagatagactatatagcgcatacaagcgtacattaaaaaatccttatgcgtatgat
cttagaagagcaaagcagtatttagctaaggcaggttttccagctggtaaaggccttcct
gaaattacattagatacctctacaggagaattttttacagatagagcttatttttttgct
cgctgtatggctaaaattggcatacgcgttagggttattgccaatgtttgttcggaatta
gatagaaagagtgaaaatcaagccactatgatgcatatgaatgcctgggtggcagatgac
atagaccctttgtcttttttgcaggtggttcgtacgaaaaatttgataggattgtattat
gaaaaccctacctttaataggctttttgatcaagcagaaacaatcatcgacaaaagggaa
agggcgggtatttttatcaaactgagtagaatggttgcagaggaggtccctgtgattggt
gcggtacacgctcctattcagtttttgcaccagaagtgggttaaaaatgttttttatagt
gggattgaacaggagctggatcaatatattgcagtagatatggcagagaaaagtaaggca
gctagctga
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