Corynebacterium hesseae: R3O64_01845
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Entry
R3O64_01845 CDS
T10652
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ches Corynebacterium hesseae
Pathway
ches03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ches00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R3O64_01845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ches03021
]
R3O64_01845
03400 DNA repair and recombination proteins [BR:
ches03400
]
R3O64_01845
Enzymes [BR:
ches01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R3O64_01845
Transcription machinery [BR:
ches03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R3O64_01845
DNA repair and recombination proteins [BR:
ches03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R3O64_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WXX39124
LinkDB
All DBs
Position
374911..378906
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVEAEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEVLKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGEDEIGGE
GRYRPATEDRPEQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIEAEHFPDGWQ
KGQAWLAETTLGRIMFNDLLPWNYPYLEGVMVRKGGAGNKMLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMHDVLVLPNKHEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGNAVEELYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGVEIAEGSYDLHELWETSASGRVVANDVKDENGEVIAEAGADLTEELS
RKIVNAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGKLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVTTGDRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
QLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLEEDYTF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcgggctggccacggccgaggacatc
cgtcgctggtccaagggcgaggtcaagaaacccgagaccattaactaccgcaccctcaag
ccggagaaggacggcctcttctgtgagcgcatcttcggcccgacccgtgactgggagtgc
tcctgcggtaagtacaagcgcgtgcgctacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgtgagcgcatgggccacatcgagctggccgcgccg
gttacccacatctggtacttcaagggcgttccttcccgcctgggctacctgctggacctg
gctccgaaggaccttgagcgcatcatctacttcgctgccaacatcatcacctccgtggac
gaggaagctcgccacaatgaccagtccactctggaagcagagatgcttctggagaagaag
gacgtggaggatgacgtcgaggcagagatcgctgagcgcgctgccaagctcgagcaggat
ctggccgagctggaggccgccggcgccaaggccgacgcccgccgcaaggtccagaacgct
gccgacaaggaaatgcagcacatccgcgagcgcggtgagcgcgaggttgctcgcctcgac
gaaatctggaacaccttcatcaagcttgctccgaagcagatgatcatcgatgagaccatc
tacgaagagctcgttgaccgctacgaggattacttcaccggcggcatgggtgctgaggcc
atccagaccctcatccgcaacttcgacctcgaagctgaggctgaggttctcaaggagatc
atcaacaacggcaagggccagaagaagatgcgtgccctcaagcgcctgaaggtcgtcgcg
gccttcctgcgctcgggcaatgacccggccggtatggtgctcgatgccatcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggtgctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcc
ctcttcgacaacggccgtcgcggccgtccggtcaccggtccgggcaaccgcccgctgaag
tccctgtctgacctgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggccgttccgtgattatcgtcggcccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggccctggagctgttcaagcccttcgtcatgaagcgcctg
gtagaaaacgactacgcgcagaacatcaagtccgccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtcctcgaagaggccatttccgagcacccggtgatgctgaaccgt
gcaccgaccctgcaccgcctgggtatccaggccttcgagccgaagctcgtcgaaggtaag
gccatccagctgcacccgctggcttgtgaggctttcaatgccgacttcgacggtgaccag
atggcagtccacctgccactgtccgccgaggcacaggctgaggcacgcgtcctcatgctg
gcttccaacaacatcctgtccccggcctccggtaagccgctggctatgccgcgtctggat
atggttaccggcctgtactacctcaccatggacaagggtgaggacgagatcggtggcgag
ggccgttatcgccccgccacggaggaccgtccggagcagggcgtgtactcctcctacgcg
gaggccatcatggctcgcgaccgcggcgttctgggcctgcaggccccgatcaaggtccgc
atctcccacctgcgcccgccggcagacatcgaggcagagcacttcccggatggttggcag
aagggccaggcatggctcgctgagaccaccctgggccgcatcatgttcaacgacctgctg
ccgtggaactacccgtacctcgagggcgtcatggtccgtaagggcggcgctggcaacaag
atgctgctcggtgacgtcattaatgacctcgccgcgaagtacccgatgattaccgttgcc
caggttctggacaagatgaaggacgctggcttctactgggccacccgttccggcgtgacc
atcaccatgcacgacgtgctggtcctcccgaataagcacgaggtgcttgagtcctacgag
aaggaagccgagcgcatcgagcgtaagtactgggagcagggtgctctgaccgagcgcgag
cgctacgaccgcctggttgagctgtggaaagacgccacggacaccgtgggtaacgccgtc
gaggagctgtaccccgacgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgtgaaggcctgtcggttctggagtac
ttcaacaactcgcacggttcccgtaagggcttggcggataccgctctgcgtaccgctgac
tccggctacctcacccgtcgtctggtggacgtggcgcaggacgtcatcgtccgcgaagag
gactgtggcacccgccagggcgtgcgcgtcccgctcggtgtcgagatcgccgaaggctcc
tacgacctgcacgagctgtgggagacctccgcatccggccgcgtcgtggccaacgacgtc
aaggatgaaaacggcgaggtcatcgctgaggcaggcgccgacctgaccgaggagctcagc
cgcaagatcgtcaatgcgggcgttctggagatcaaggtccgctccgtgctgacctgccag
accccggctggtgtctgcgccaagtgctacggcaagtccatggcctccggcaagctcgtc
gatatcggcgaggcagtcggcatcgtggccgcacagtcgattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggcggtctgccg
cgtgttcaggagctcttcgaggcccgtaacccgaagaaccgcgctcctatcgcttcggtc
gatggcaccgtgtctctgtccgatgagggcaacttctggacgctgaccatcaccccggat
gatggctccgacaacgtggtctacgagaagctgtcgaagcgccagggcctggctcaggtc
cgccgcccgatggagtccaacccggatgccatgatcgagcgctcgctgcgcgacggtgac
cacgtcaccaccggtgaccgcctcatgcgcggtgcggctgacccgcacgacgtgcttgag
gtcctcggccgccgcggtgtggagaagcacctcatcgacgaggttcaggccgtctaccgt
gcacagggtgtggccatccacgacaagcacatcgagatcatcatccgtcagatgctgcgt
cgcggtaccgtcatcgacgccggtaccaccgacctgctgccgggcaacctcattgacctc
tctgaggccaagcaggttaacgcggctcaggtcgctgagggtggccagccggctcagctc
cgcagtgagatcatgggtattaccaaggcctcgctggctacggagtcctggctgtctgcg
gcctccttccaggagaccacgcgcgtgcttaccgacgccgccatcaacaagcgctcggat
cagcttattggtctgaaggagaacgtcatcatcggtaagctgattccggctggtacgggt
atttcccgataccgcaacatcagcgtcaagccgactgaggccgcacgcaatgctgcgtat
tccatcccgacctacggtgattccatctacggcgacgatggcttcggtgagttcaccggt
gcttctgtcccgctggaggaggactacaccttctag
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