KEGG   Corynebacterium hesseae: R3O64_04110
Entry
R3O64_04110       CDS       T10652                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ches  Corynebacterium hesseae
Brite
KEGG Orthology (KO) [BR:ches00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ches03400]
    R3O64_04110
Enzymes [BR:ches01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     R3O64_04110
    5.6.2.6  RNA 3'-5' helicase
     R3O64_04110
DNA repair and recombination proteins [BR:ches03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R3O64_04110
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_3rd_Lhr WHD_2nd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII DUF6406 PhoH DEXQc_Suv3
Other DBs
NCBI-ProteinID: WXX39543
LinkDB
Position
870239..875191
AA seq 1650 aa
MSKNVLAKFRPQVAGWFQDVFAAPTPVQKQAWEAISGGANALVVAPTGSGKTLAAFLWGL
NSLVEREGQTALPLSNEPSREGAHDGVRVLYISPLKALGVDVENNLRAPLNGIARTAERL
GLEVPDITVGVRSGDTPQAERARQVRKPPDILITTPESAYLMLTSKAAGILKTVDTVIID
EIHVLAGTKRGVHLALTLERLGLIAGEFQRIGLSATVRPLSAVANFLGGDRPVDIIAPPA
KKRWQLDVHVPVEDMSDLPTPEQGSPIGEATVDDPLGITEGPQDALRLHAQRGETNTQGG
VGDSALPTAKSIWPFIEEELYAEVMEKRSTLVFVNSRRTAERLTSRLNELYAQEHDPESL
SPATRRDPAQLMKQVDVAGKAPAVIARAHHGSVSKDERALTERMLKEGTLKAVVATSSLE
LGIDMGAVELVVQVESPPSVASGLQRVGRAGHSVGAVSHGSFYPKHRADLVQSALTVARM
EEGLIEEMHSPRNPLDVLAQQTVAAVVASASAGTSEGLEADTWYDTVRRAWPYKDLAREV
FDSVLDLVSGVYPSTDFAELKPRVVYDRVTGVLTPRPGAQRVAVTNGGTIPDRGMFGVFL
VGTGEAGSAPRRVGELDEEMVYETRVGDIFTLGATSWRVEEITRDQVLVTPAPGHTGRLP
FWNGDSAGRPYELGKALGAFRREAFSDPSVVRGADENARRNIAAYLQEQNEATGLIPDEK
TLLLERFTDELGDWRVLLHTPFGRPVNAAWALAVGQRVAERTGMDAQAVAGDDGIVLRLP
QGEADPDAALFLFEADEIADIVTEQVGNSALFASRFRECAARALLLPRRNPGKRAPLWQQ
RQRAEQLLDVARNYPSFPIILETVRECVQDVYDLPALTEVMRELAHRRIRIAEVTTEQPS
PFASSLLFNYTGAFMYEGDSPLAEKRAAALALDPALLAKLLGTVELRELLSAEVIAEVHA
QLQRTTPERQARTTEEVADLLRVLGPIPVEEFGAHATVPLSALDALGARIMRVRINGREH
VAQSLDAPLLRDGLGIPVPPGIPAQQATITDAVDQLVSRWARTRGPFVAREVQDAFGLSA
AVAHSTLNGLDSILAGHYRQGVEEQEYCAAEVLKVIRSRSLAAARAATQPVSPAAFGRFL
PDWQQVAAVGRRPVLRGVDGVFAVIEQLAGVRLPASAWESLILPQRVGDYSPTMLDELTA
SGEVLIVGAGKAGSNDPWIMLLPVDYAAQLAPQVSAEEAGLSLLQTQLLEALQGGGSYLI
SDIQSQLSGTVEEVREALWGLVEAGLVSPDSFAPIRAHLAAGGRAGRAAHRARRRPTRSR
LRMGRTSFAQAHNASGSPTAPDVVGRWSLSVRAASDATSRSIAHGEAWLDRYGVLTRGSV
VAEDVLGGFALAYKVLSGFEESGKAMRGYVIEGLGAAQFSTPAVIDRLRGVDDSPDVTGW
PSGTREPQAYVLAATDPANPYGAALSWPTTDAGESAARPTRAAGALVVLMDGLPVVHLTR
GGRTLTTFFNALPEGIERTEVLAAVLAGLNELVAAGHLSKVVIEKANGRPIFDSKLGGEL
RALGAALTPKGVRITGAAHTASSGRARQHGQSGEAARSAEPYRPARRGGRRAVEAMEELT
FDDPEDSTESGGPSTAPGSPGGFRPRRRRR
NT seq 4953 nt   +upstreamnt  +downstreamnt
atgtccaaaaacgttctggcgaagttccgcccgcaggtggccggttggttccaggacgtt
ttcgccgcccccaccccggttcaaaagcaggcgtgggaggcgatttccggcggcgcgaac
gcactggttgtagcaccaaccggttccggtaagacgctcgcggcatttctgtggggcttg
aattccctggtggagcgcgagggccagaccgccctgccgctgagcaatgagccgtcccgc
gagggcgctcatgatggcgtgagagtgctgtatatctcaccacttaaggctttgggcgtg
gacgtggagaataatctgcgtgccccgctcaacggcatcgcccgcaccgctgaacggctg
ggcctggaggtgccggatattaccgtcggcgtgcgctcgggggataccccgcaggcagag
cgcgcccgccaggtgcgcaagccaccagacatcctcatcaccacgccggaatcggcctac
ttgatgctcacctcgaaggctgcggggattttgaagaccgtggataccgtcatcatcgat
gagatccacgtcctggccggcaccaaacgcggcgtgcacctagccctaaccttggagcgc
ctcggactcatcgccggggaatttcagcgcatcgggctttccgccacggtgcgcccgctg
agtgctgtcgcgaacttcttgggcggtgaccgccccgtggacatcattgccccgcccgcg
aagaagcgctggcagctcgacgtccacgtgccggtcgaggacatgtcggatctgcccacc
ccggagcagggatcacctatcggggaggcgactgtcgacgacccccttggcatcaccgaa
ggcccccaagacgcgttgcgtttacacgcgcaacgcggggaaactaacacgcagggcggg
gttggagattccgccctgcccacggcgaagtccatctggcccttcatcgaggaagagctc
tacgccgaagtcatggagaagcgctccaccctcgtcttcgtcaactcgcgccgcaccgcc
gagcggctcaccagccggctcaacgagctttatgcccaggagcacgacccggagtccttg
agcccggctacccggcgcgacccggcccagctgatgaagcaagtggacgtcgccgggaag
gcccctgccgtcatcgctcgtgcgcaccacggttcggtgtccaaggatgagcgcgcgttg
acggagagaatgctcaaagaaggcacgctcaaggccgtggtggccacgagctccctcgag
ctgggcatcgacatgggtgcggtggagctggtggtgcaggtggaatctccgccgtcggtg
gcttccggcctgcagcgcgtgggccgcgccgggcactccgtcggcgcggtctctcatggc
tccttctatcccaagcaccgcgcggatctcgtgcaatccgcgcttaccgtcgctcgcatg
gaggagggcctcatcgaggaaatgcactccccgcgcaacccgttggatgtcttggcacag
cagacggtggcggcggtagtggcgtcggcaagcgcgggcacgagtgagggactagaggcc
gacacatggtacgacaccgtgcgccgcgcctggccttataaggacctggcgcgcgaggtt
ttcgactccgtgctggacctggtcagtggtgtgtatccctcgacggattttgcggagctg
aaaccccgtgtggtctatgaccgtgtgacgggcgtgctgaccccgcgccccggcgcacag
cgtgtggcggtgaccaacggcggcaccattccggaccgcggcatgttcggggtgttcctg
gtgggaactggtgaggccggttccgcgccgcgccgcgtgggtgagctcgatgaggaaatg
gtctatgaaacccgggtgggggacatcttcaccctcggcgcaacgagctggcgcgtggag
gagattacgcgcgaccaggtgctggtgacacccgcgccggggcacaccgggcgtttgcct
ttttggaacggcgactccgcggggcggccctatgagctgggcaaggcgctgggtgcgttc
cggcgtgaagcattttcggacccatccgtggtgcgcggcgccgatgagaacgcgcggcgc
aatatcgccgcctacctgcaggagcagaacgaggccaccgggctcatcccggatgagaag
acgcttctgctggagcgcttcacggatgagctgggggattggcgcgtgctgttgcacacc
ccgtttggtcggccggtgaatgcggcgtgggcgctggcggtggggcagcgcgtggcggag
cgcaccgggatggatgcgcaggccgtggcgggtgacgacggcatcgtgctgcgcttgccg
cagggggaggcggacccagatgcagcgctctttcttttcgaggccgatgagatcgccgac
attgtcaccgagcaggtgggaaactccgcgctctttgcttcccggtttagggagtgcgcg
gcgcgtgcgctgcttctgccgcggcgtaacccgggcaagcgcgcgcccttgtggcagcag
cgccagcgcgcagagcagcttctcgacgtcgcccgcaactacccctctttccccatcatc
ctggagaccgtgcgcgagtgtgtgcaggatgtctatgacctgccggcgctcacggaggtc
atgcgggagctggcgcaccgccgcattcgcatcgcggaggtcaccacggagcagccttcg
ccgttcgcatcttcgctgctgttcaactacaccggcgcgttcatgtacgagggggattcg
cccctggcggaaaagcgcgcggcggccttggcgttggacccggcgttgctggcgaagctt
ctggggacggtggagctgcgcgagcttctctccgctgaggtcattgctgaggtccatgcc
cagctgcagcgcaccactccggaacgtcaggcgcgcaccaccgaggaggtcgcggacctg
ctgcgcgtgctgggccccattccggtcgaggagttcggcgcgcacgccacggtgccgctg
agcgcactcgatgcgctcggtgcgcgcattatgcgggtgcgcatcaatggccgcgaacac
gtggcgcaatcattggatgcgccgctgcttcgcgacggtttgggcatccccgttccgccc
ggcatccccgcccagcaggccacgattaccgacgccgtggaccagctggtcagccgctgg
gcgcgcacgcgcggtccgtttgtggcgcgcgaagtgcaggacgcctttggcctctctgcc
gcagtggcgcattcgacgctgaacggtctggattccatcttggcggggcactaccggcag
ggcgtggaagagcaggaatactgcgcggcagaagtgctcaaggtcatccgctcgcgctcg
ctggcggctgcccgggcggccacgcagccggtctcacccgcagccttcgggcgcttcctg
ccggactggcagcaggtggccgcggtgggtcggcgcccagtgctgcgcggtgtggacggc
gtctttgccgtcatcgagcagctggccggtgtgcgcctgccggcttctgcctgggagagc
ctcatcctgcctcagcgcgtaggcgactattcgccgacgatgctcgatgagctcaccgcc
agcggcgaggtcctcatcgtgggcgcaggcaaggccggctccaacgacccgtggatcatg
ctgttgccggtggattatgccgcacagctcgctccgcaggtctctgcggaggaggctggc
ctgtccctgctgcaaacgcagctgctggaggctttgcagggcggtggcagctacctcatc
tccgatatccagtcgcagctgagcggcaccgtcgaggaagttcgcgaggccctctggggt
ctggtggaggcaggcttggtcagtcccgattccttcgcccccatccgcgcccacttggcc
gcaggcggccgagccggacgcgccgcacaccgtgcacggcgccggcctacccgctcccgg
ttgcgcatggggcgcacctcctttgcccaagcacacaatgcgtctggttcgccgaccgca
ccggacgtggtgggacgctggtcgctgtccgttcgcgcggctagcgatgcaacctcgcgt
tccattgcgcacggcgaggcctggctggaccgctacggcgtgcttacccgcgggtctgtg
gtggccgaggatgtcctcggcggcttcgccttggcctacaaggtgctctctggctttgag
gagtccggcaaggccatgcgcggctatgtcattgaaggactaggcgcggcgcagttctcc
acgcccgcggtcatcgaccgcctacgcggcgtggatgattcccccgatgtcacgggctgg
ccctccggaacccgcgagccgcaggcctatgtcctcgccgcgaccgacccggccaatccc
tatggtgcggcgctgtcgtggcccactaccgatgccggcgaatccgcagcccgcccgacc
cgcgccgcgggtgccttggtggtgctcatggatggcttgccggtggtgcacctgacccgc
gggggaaggacgctgaccacgttcttcaacgctctgcccgaaggaatcgagcgcaccgag
gtactagccgcagtgctagcagggctcaacgagctggttgccgccgggcacttgagcaag
gtggttattgagaaggcgaatgggcggcccatcttcgattcaaagctcggcggcgagctg
cgtgcactgggggcggcactgaccccgaagggcgttcggattacgggggctgcccacacc
gcctcttccggccgtgctagacagcacggccaatctggagaagccgcgcgctccgccgag
ccttaccgtcccgcacgtcgcggtgggcgccgtgctgtcgaggcgatggaggagctcacc
ttcgatgatccggaggattccactgagtctggtggcccatcgactgcaccgggcagccca
ggtggtttccgcccgcgccgtcgacgccgctga

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