Corynebacterium hesseae: R3O64_05325
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Entry
R3O64_05325 CDS
T10652
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ches Corynebacterium hesseae
Pathway
ches03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ches00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3O64_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ches03019
]
R3O64_05325
03009 Ribosome biogenesis [BR:
ches03009
]
R3O64_05325
Enzymes [BR:
ches01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R3O64_05325
Messenger RNA biogenesis [BR:
ches03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R3O64_05325
Ribosome biogenesis [BR:
ches03009
]
Prokaryotic type
rRNA helicases
R3O64_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
adh_short
AAA_22
Cj1289-like_C
Motif
Other DBs
NCBI-ProteinID:
WXX39776
LinkDB
All DBs
Position
1138441..1140456
Genome browser
AA seq
671 aa
AA seq
DB search
MSITDNATGGVNEPEEFNKSESQENSQGGEALDASQVSNHDTGAANNPEDTGAEEASAND
NSQGFAHLGLPDDVQEAVSKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALP
VLSQIDTEARYPQALVLAPTRELALQVADSFQSFADHLGRIEVLPIYGGQAYGIQLSGLR
RGAQIIVGTPGRVIDHLEKGSLDISQLRFLVLDEADEMLNMGFQEDVERILEDTPEDKQV
ALFSATMPNSIRRLSKQYLNNPAEITVKSERRTNDNITQRFLLTPHRHKMDAFTRILEVI
DYDAIIVFCRTKHATEDVADSLKEAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATD
VAARGLDVDRITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERV
TNARLEEMDLPTADEVNAKRKEKFFAAIGASQQDKQFDFFRDMVREYSAAENVAMDDIAA
SLAVQLQGGTDFLLKERPVSKKDRRERDRFERDGRGRDRDRDGRGRDRGGRDRDRGPRRP
DGDFETYRLDVGKRQGVRPGAIVGALANEGGLTSKDFGRITIAVGHTLVDLPKNLDPAVL
DRLKDTRISGQLIKIQKDTGRPPRRNFDDDRGRGGYGGRGRGGRGDRGGYRDRDRGGRGR
DRGGRRGGWRD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtcaacgagccggaagaattcaataagtcg
gaatctcaggaaaactcgcaaggtggcgaagcattggacgcttcgcaggtgtcgaaccat
gacaccggggctgcgaataaccctgaggacaccggcgctgaagaagcttcagccaacgac
aactcccagggttttgcacacctcggccttcccgatgacgttcaggaagccgtgtccaag
gtgggctttaccaagccatccccgattcaggaagaaaccatcccgatcctcatggagggc
cgcgacgtcgtcggcctcgcccaaacgggtacgggtaagaccgcagcctttgcactgccg
gtgctctcccagatcgatactgaggctcgctatccgcaggcccttgtccttgcgcccacg
cgcgagctggctctccaggttgcggactccttccagtccttcgccgaccacttgggtcgc
atcgaagtcctgcctatctacggtggccaggcttatggcatccagctctctggtctgcgc
cgtggtgcccagatcattgtgggtaccccgggccgtgtcatcgaccacctggagaagggc
tccctggatatctcccagttgcgcttcctcgtcctcgatgaggcggacgagatgctcaac
atgggcttccaggaagacgttgagcgcattcttgaggacacaccagaggacaagcaggtc
gcactcttctcggccacgatgccgaactccattcgccgcctgtccaagcagtacctcaac
aaccctgccgaaatcacggtgaagtcggagcgccgcaccaatgacaacatcacgcagcgc
ttcctcctgacgccgcaccgccacaagatggatgccttcactcgcatcctcgaggtcatt
gactacgacgccatcatcgtcttctgccgcacgaagcatgccacggaggatgtcgctgac
agcctcaaggaggccggctacaacgccgctgccattaacggcgatatcgcgcagcagcag
cgtgagcgtaccgtcgatcagctcaaggatggccgcctggacatcctggtggctaccgac
gttgctgcccgcggcctcgacgtcgaccgcatcacccacgtggtcaactacgacatcccg
aatgacaccgagtcctacgtgcaccgcattggccgtaccggccgtgctggccgcactggc
gaggccatcctgttcgtcaccccgcgtgagcgccgcatgctgcgctccatcgagcgcgtg
accaacgcccgcctggaggagatggatctcccgaccgcggatgaggtcaatgccaagcgc
aaggagaagttcttcgcggccatcggtgcctcccagcaggacaagcagttcgacttcttc
cgcgacatggtgcgcgaatactccgcggcagagaacgtggcgatggatgacatcgcggcc
tccctggctgtgcagctgcagggcggaacggacttcctgctcaaggagcgcccggtgtcc
aagaaggaccgccgcgagcgcgatcgctttgagcgcgatggccgcgggcgtgaccgcgat
cgtgatggccgcgggcgcgaccgtggtggccgcgaccgtgaccgcggcccgcgccgcccg
gacggggactttgagacgtaccggttggacgtcggcaagcgccaaggcgtgcgccccggc
gccattgtgggtgcgttggccaacgaaggtggcctgacctccaaggacttcggccgcatc
accatcgccgtgggccacaccctggtggacctgccgaagaacctggacccggcggtgctg
gaccgtctcaaggacacccgcatttccggccagctcatcaagattcagaaggataccgga
cgcccgccgcgccggaacttcgacgatgaccgcggccgcggcggttacggcgggcgagga
cgtggtggacgcggtgatcgtggcggataccgtgaccgtgaccgcggtggacgcggccgt
gatcgtggtggacgccgcggcggctggcgcgactag
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