Corynebacterium hesseae: R3O64_07855
Help
Entry
R3O64_07855 CDS
T10652
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ches Corynebacterium hesseae
Pathway
ches03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ches00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3O64_07855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ches03019
]
R3O64_07855
Messenger RNA biogenesis [BR:
ches03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R3O64_07855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
DUF7822
Motif
Other DBs
NCBI-ProteinID:
WXX37861
LinkDB
All DBs
Position
complement(1678775..1680844)
Genome browser
AA seq
689 aa
AA seq
DB search
MTESRNRSRKVTRKAGPPSETETASNEAASPVFQAPKESAASGASSKESGNSDDGNRRSR
SRGSRGGRGRGRGGNNNHNNGNNNNGGRNNRNRNNNRGRRNVPKSMQGADLTKRLPEPPK
QQKDSLRIYALGGISEIGRNMTVFEYQDEMLIIDCGVLFPSSGEPGVDLILPDFGPIEKK
IHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQKPKFVEVNE
KSDVNYGPFRCRFWAVNHSVPDALGVMLGTPAGNIIHTGDIKLDQTPLDNRPTDLPALSR
YGDEGVDLMLCDSTNANIPGVSASEGDIPATFKRLVSGAKQRVIIASFASNVYRVQAAID
AAVAAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKVLLITTGTQGE
PMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVFGVINMLSQIGAEVITNKEAKV
HASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAVSTGVARDRVVLAQNGVVVD
LRNGRAEVVGQIPVGNLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVIDNRTSRLLEH
PTVSTTGFSDDDRGIVPEVAEMVENTMNDLAAEGENDTYRMVQKLRRKVSKLMDSKYKRE
PVILPTIVPTNSDILLPDDDEVHASRESL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcccgtaaccgttcccgcaaggtgacccgtaaggcgggtccgccttcggag
accgagaccgcctcgaatgaggcggcttcgccggttttccaagcgccgaaggaatcggct
gcttccggcgcatcctctaaggagtctggaaactctgacgacggcaaccgtcgttcccgt
tctcgtggttcccgtggcggccgtggtcgcggccgcggcggcaacaataatcacaacaac
ggcaataacaacaacggtggtcgtaacaatcgcaatcgcaacaacaaccgcggccgtcgc
aacgtgcctaagtccatgcagggcgcggatctgaccaagcgtctgccggagccgccgaag
cagcagaaggactctctgcgtatctatgccttgggcggtatttccgagatcggtcgaaat
atgaccgtctttgagtaccaggatgagatgctcatcatcgactgtggtgtgctcttcccg
tcctccggtgagcctggtgtggacctgattctcccggactttggcccgattgagaagaag
attcacaaggtcaaggcgctcgtcgtaacccacgcgcacgaggaccacattggtgctatc
ccgtggctgctgaagctgcgcccggatatcccgattgtggcatcccgcttcactattgcg
ttgattgctgccaagtgtaaggaacaccgccagaagccgaagttcgttgaggtcaatgag
aagtccgatgtgaattacggtccgttccgttgccgcttctgggcagtgaaccactccgtc
ccggatgccctcggcgtcatgctgggaaccccggctggcaacatcatccacaccggtgat
atcaagctggaccagaccccgctggataaccgcccgacggatctgccggccctgtcgcgc
tacggcgacgaaggcgtggacctcatgctgtgcgattccaccaacgccaacatcccgggt
gtgtccgcctctgagggcgacattccggcaacgttcaagcgtctggtttctggggcaaag
cagcgcgtgatcatcgcatccttcgcctcgaacgtctaccgcgtgcaggctgctatcgac
gccgccgtggccgccggccgcaaggttgcgttcaacggccgctccatgatgcgcaacatg
gaaatcgcggagaagatgggcttcctgaaggttccgcgcggcaccatcatcccgatcgat
gaggcagccaagatggctccgcacaaggtgctgctcatcaccaccggtacccagggtgag
ccgatggcagcgctgtcccgcatggcccgtcgtgagcatcgccagatcaccgtccgcgat
ggtgacctcatcatcttctcctcctccctgattccgggtaatgaggaggccgtgttcggc
gttatcaacatgctgtcccagattggcgctgaggtcatcacgaacaaggaagctaaggtc
cacgcctccggccacggctatggtggcgagctgctcttcctctacaacgctgcacgcccg
aagaatgccatgccggtgcacggcgagtggcgccacctgcgtgcaaacaaggagctggca
gtctccactggtgtggcccgtgatcgcgtggtccttgcgcagaacggcgttgtcgtcgat
ctgcgcaacggccgtgctgaggtcgtcggccagatcccggtgggcaacctctacgtcgat
ggtgtgtcgatgggtgatgtcgacgccgataccctcgcggatcgcaccaacctgggtgcc
ggcggtgtcgtttctatcacctgtgtcatcgataaccgcacgtcgcgcctgcttgagcat
ccgacggtgtccacgacgggcttctccgacgatgatcgcggtatcgtgcctgaggtcgcc
gagatggtggagaacaccatgaatgacctcgccgctgagggggagaacgatacctaccgc
atggtgcagaagctgcgccgcaaggtatcgaagctcatggactccaagtacaagcgcgag
ccggtgattctgccgaccatcgtcccgacgaactcggatatcctgttgcctgacgacgac
gaagttcacgcttcccgcgaatcgctctaa
DBGET
integrated database retrieval system
