Chitinophaga pendula: KTO58_04090
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Entry
KTO58_04090 CDS
T08407
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
chf
Chitinophaga pendula
Pathway
chf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KTO58_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_04090
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_04090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Flu_PB2_3rd
Mor
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
UCJ08377
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All DBs
Position
1029769..1030626
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AA seq
285 aa
AA seq
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MRQLKIATQITNRDSQAVEKYLQEISKIPLLTPEEETVLAQRIKMGDQKALERLTTGNLR
FVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIRQSILQALAE
QGRLVRLPQNKIGTYNKANKAYMAFEQENEREPSTEELAEILEMSESEINNIFQSNTRHM
SLDAPVHEAEDVAMGDLLEGGDITDDDVMRDSLREEIRRVLKSLSPREAEIVNAYFGLDG
ENGATIEQIGQKYDLTKERIRQIKERAIKRLQKARYSGALKSYLG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacttaaaattgccacccagatcactaaccgtgattcgcaggcggtagaaaaa
tacctgcaggaaatctctaagatccctttgttaacacctgaggaagagaccgtattggcg
caacgcattaaaatgggtgaccagaaggctcttgaaagattgactacaggaaacctccgc
ttcgtagtatccgttgctaaacaatatcagcaccaggggctcagcctcagcgaccttatc
aatgaaggcaatttaggtctgatcaaagcagcgcaacgcttcgacgaaacaaaaggtttt
aaattcatttcctacgctgtatggtggattcgccaatccatcctgcaggctttggcagag
caaggtagattggttcgcctgccacaaaacaaaattggcacctataacaaagccaataag
gcgtatatggcattcgaacaggaaaacgagcgggaaccgtctacagaggaattggccgaa
atcctggaaatgtccgaatcggaaatcaataacatcttccaaagcaatacccgacacatg
tcactggatgctcccgtacatgaagccgaagacgtagccatgggcgacctgctggaaggt
ggcgatatcaccgacgacgacgtgatgcgcgactccctgcgtgaagaaatccgccgcgta
ctgaaatccctcagccctcgcgaagcagaaatcgtaaacgcctactttggtctggatggt
gaaaatggcgcaacaatcgaacaaattggtcaaaaatacgatctcaccaaagaacgtatc
cgccaaatcaaagaacgcgctatcaaacgcctgcaaaaagcgcgttacagcggcgcactg
aaatcttatctgggataa
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