Chitinophaga pendula: KTO58_06785
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Entry
KTO58_06785 CDS
T08407
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
chf
Chitinophaga pendula
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
mRNA_cap_enzyme
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UCJ10215
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Position
complement(1722568..1724505)
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AA seq
645 aa
AA seq
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MLATLVDKPFDQPGWLYEVKWDGYRVITFKNKQILELKSRNDKSFNEKFYTVYQALQQWR
ADVIVDGEVVVVDETGKADFGQLQNWRSEADGTLRYYIFDLLWYKGYDLRGLPLEKRKVM
LQQLLPVSDILYYSHDFHTDGTAFLAAARNMSLEGIIAKRCNSTYHTGERTKDWLKIKAN
KRQEVIIGGYTRNEGSSKPFSALLLGVYRKGKLVYSGKTGTGWSVQQQKLLLQQFKRLEV
NKVPFDKEPDYNKPSRFRPHPPKAEVTWLRPLLICEVSFAEITNDGVMRHASFEGLLEDK
QPSDVVLEKETATAAIVKTADASALLLMPAAGGTRRTLLNPKDVTQVRKIGGHELKFTNL
HKVFWPKEKISKRDLINYYYQVASYILPYLKDRPQSLNRFPNGIDGKSFYQKDVTGKVPD
WMETYGYFSEGDEEQKHYLLCNDEATLLYMVNFGCIEMHPWSSTIRKPDHPSWAMIDLDP
DKQTFDQVIEAARMTKAVLDDMGVVSYCKTSGSTGLHIYIPLGNKYTYDQCQEFARGVVT
LVHRQLPAFTTLERIVSARKGKMYLDFLQNRPHATLAAPYSLRPKPGATVSMPLHWDEVR
AGMKMKDFNIFNALERLQSDSDIFKPVLGKGIDLKKIIASYQVKD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgctagctacactcgttgacaaacccttcgatcagcctggttggctttatgaggtgaag
tgggacggttatcgcgtcattactttcaagaataagcagatattggagttgaagtcacgc
aatgataagtctttcaatgaaaaattttatactgtttatcaagctttgcagcaatggaga
gctgatgttatagtagatggcgaagtagtggtggtagatgaaactggcaaagctgatttc
gggcagttgcagaactggcgaagtgaggcggatggtacgttacgttattatattttcgat
ctgttgtggtataaagggtatgatctaagaggtctgccgctcgaaaagcggaaagtcatg
ctacagcagcttcttcctgtaagcgatatactttattacagtcatgattttcataccgat
ggtaccgcgtttctggcagcagcccgtaacatgtcgttggaagggatcattgccaaacgt
tgcaatagcacttatcatacaggtgaacgaacgaaggactggctcaagataaaagccaac
aaacgacaagaagtcattattggcggttatacgcgtaatgagggaagtagcaaaccattc
agtgcgttgctactgggtgtgtatagaaagggtaaactagtctattctggcaaaacaggt
actggctggagtgtgcagcaacaaaagttattattgcagcaattcaagcgactagaagtc
aataaggtaccttttgataaggagccggattataataagcccagtcgtttccggcctcat
ccgcctaaggcagaggttacctggttacgaccattgctaatctgcgaggtaagttttgcg
gagatcaccaatgatggtgtgatgcgtcatgcttcttttgaggggttgctagaagacaaa
cagccgagtgatgtagtgttggaaaaagagacagcaacagctgccattgttaaaaccgcc
gatgcgagcgctcttctgcttatgcccgcggctggtggtacacgccgtacattactcaat
ccgaaagatgtaacgcaggtacgtaagattggtggtcatgaactaaaattcactaatttg
cataaggtattctggccgaaagaaaaaatcagcaagcgggatctgatcaattattattat
caggtagcatcttacatacttccttacttaaaggatcgtccgcaatcattgaatcgtttc
ccaaatggtatcgacggcaaatcgttttatcagaaagatgttaccgggaaagtgccggac
tggatggagacctacggatatttcagtgaaggtgatgaggagcagaaacactatttgtta
tgtaacgacgaagcgacgctactgtacatggtcaacttcggttgtattgagatgcatccc
tggagtagtacgatcaggaaaccagatcatccttcctgggcaatgatcgacttggacccg
gataaacagacttttgatcaggtgattgaggctgcgaggatgacgaaggctgtactagat
gatatgggcgtagtgtcttattgtaaaaccagtggatcaaccggattgcatatctatatc
ccattagggaacaagtatacgtatgatcaatgtcaggaatttgcgcggggggtagttacg
cttgtacatcgtcagctaccggcctttacaacacttgagcggatcgtcagtgcacgaaag
gggaagatgtatctcgactttctgcaaaaccggccgcatgcgacacttgcagcaccttat
tccctgcgtcccaaacccggtgctacagttagtatgccattgcactgggatgaggtaaga
gcggggatgaaaatgaaagactttaacatcttcaatgcattggagcgactacagagtgac
agcgatatattcaaaccagtgcttggaaaaggtattgatctaaagaaaattattgcgtca
taccaggtaaaggattga
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