Chitinophaga pendula: KTO58_08035
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Entry
KTO58_08035 CDS
T08407
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_08035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_08035
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_08035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
PhyR_sigma2
EIIC-GAT
NDUFC2_fungi
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UCJ09120
LinkDB
All DBs
Position
complement(2111588..2112256)
Genome browser
AA seq
222 aa
AA seq
DB search
MIDILGELFYLSTRLSMPLHQPNIDLLKGVIENNEQAIHHLFRLYYSSLGYYAQSLVQQQ
QEAEDIAIDAFLKFLQRKEQFQTLAAVKSFLFTTVKNACIDYLRKEKRHQQAHAEIVHIE
QAPAAEDTLEITAMVLQSVYEEIENLPTQCKLVFKALFYEGKKTNVVAEELGLSPQTVLN
QKAKAIKHLQWFLQQKGYMDTLLWGTISLQAYLLHQFHPPLQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatatattaggggaattgttttatctttccaccagattgagcatgccgttacac
caaccaaatattgatttactgaaaggagtcattgagaataacgaacaggccatacaccac
ttgtttcgcttatattatagctcattggggtattatgcgcaaagtttggtgcagcaacaa
caagaagcagaagatatagccatcgatgctttcttaaaattcttacaacgcaaagaacag
ttccaaacattagcagctgtaaaatcatttttatttaccacagtaaaaaatgcttgcatt
gattatttgcggaaggagaaacgccaccaacaggcgcacgcagaaatcgtgcatatagaa
caagcacccgcagcagaagataccttagagattacggccatggtattacaatcggtgtac
gaggaaatcgagaacctacctacacaatgtaagttagtatttaaggctttgttttacgag
ggtaagaaaaccaatgttgtggccgaagaactgggcctttcgccacaaaccgtacttaac
caaaaagcaaaagctatcaagcacctgcaatggttcttgcaacaaaaaggatatatggac
acactcctttggggtaccatctctttacaggcctatttgttacaccagtttcatcccccg
ctacaataa
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