Chitinophaga pendula: KTO58_09290
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Entry
KTO58_09290 CDS
T08407
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chf01002
]
KTO58_09290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chf01011
]
KTO58_09290
Peptidases and inhibitors [BR:
chf01002
]
Cysteine peptidases
Family C82
KTO58_09290
Peptidoglycan biosynthesis and degradation proteins [BR:
chf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KTO58_09290
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
UCJ10237
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Position
2596459..2598057
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AA seq
532 aa
AA seq
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MKQSSILFFTLLLLIWGCGPDSKKEAATTITPRNTAIQPGNAYNDLFLDSSAVEKFITST
KVNDTIADRMRSFYNARNFEFAWFDHTGLTEQALSFRSLYDYASDTVTNKGLEYRLDALI
TGENDSALTASDPQIVKTELQLTRRFVQYFLENFHEAGGLHIKQLESFIPAQRQELLSFA
AAVVKDKDQRKLSDNNADYGALHEQVKTYAALVEKGGWDTLPVQKKRSYKKGDNDAVIAG
IKKRLYVSGEFKEQDTTLAFTEGLEQAVKAFQQSHGYTASGVVSDTLLREMNIPARFRLQ
QLLINMERMRWMPASKEGKLITVNIPEFMLHVREGGKQVMDMAVVVGREGHSTVMFSGEL
NQIVFSPYWNIPSSIVRKEILNKSKQYLASQGMETTGTRNGLPVIRQKPGPKNALGRVKF
LFPNSYNIYFHDTPAKGLFNRDKRAYSHGCIRLADPVKLAQYVLADNSAWPPERIDSAMN
AGKEKWVKIKDPVPVLITYYTAWQDENKVLQFREDIYEHDHKTAGKMFSDPQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtccagtattttattttttaccctactattattgatctggggatgcggccct
gatagcaagaaggaggctgccaccacgatcaccccacgtaatacggctatacagcccggg
aatgcttataatgacctgttcctggatagtagtgctgtagagaaattcattaccagtacg
aaggtgaatgacactattgcggatcgcatgcgtagtttctacaatgcgcggaactttgag
tttgcctggtttgaccatactggtcttacggagcaggcgcttagtttccgcagtttgtat
gactatgccagtgataccgtgacgaataaggggttggaataccggttggatgctctcatt
acgggcgagaatgattcggcgcttacggccagcgatcctcagatcgtaaagacggagttg
cagttgacacggcggttcgtgcaatacttcctggagaacttccatgaggccggcggattg
catattaaacagctggagtcctttattcccgcgcagcggcaggagttactatcttttgcg
gcggcggtagtgaaagacaaggatcagcgtaagctgagtgacaataatgcggattacggc
gctttgcatgagcaggtaaaaacgtatgcggcactggtagaaaagggcggatgggatacg
ttgccggtgcagaaaaagcgatcctataaaaaaggggataatgatgctgttatcgccggt
ataaaaaagcgattatacgtatcaggagagtttaaagagcaggatacaacgcttgccttt
acggaggggctggagcaggcggtaaaggcattccagcaaagtcatgggtatacggcctcg
ggtgtggtgtcggatacgctgttgcgtgagatgaatattccggcgcggttcaggttgcag
cagttgctcatcaatatggagcgcatgcgatggatgcctgccagcaaagaaggcaagctg
atcacggtgaatattccggagtttatgctgcatgttcgggaaggcggtaagcaggtgatg
gatatggcggtggtagtggggagagaaggccacagtacggtgatgttctccggcgagctg
aaccagatcgttttcagtccttactggaatataccatccagtattgtacgtaaggagata
ttaaacaagagtaagcaatacctggcttcgcaagggatggagactacgggtacgcggaat
ggtttgccggtgatacggcagaaaccgggtcctaaaaatgctttagggagggtcaaattc
ctgttccctaacagttacaatatttattttcatgatacccctgcgaagggactttttaac
cgggataagcgggcttatagccacggatgtatccgactggcagacccggtgaagttagcg
caatacgtgttggctgataacagtgcctggccgccggagcgtattgacagtgcgatgaat
gccggaaaggagaaatgggtaaagatcaaggatcctgtgccggtgttgattacctattat
acggcctggcaggatgaaaacaaggtattgcagttccgggaagacatatacgagcacgac
cataaaactgctggtaaaatgttcagcgatccacaataa
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