Chitinophaga pendula: KTO58_10310
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Entry
KTO58_10310 CDS
T08407
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chf03036
]
KTO58_10310 (xerD)
Chromosome and associated proteins [BR:
chf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
KTO58_10310 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Med16_bridge
ARCH_RTEL1
Motif
Other DBs
NCBI-ProteinID:
UCJ09556
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All DBs
Position
2950857..2951768
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AA seq
303 aa
AA seq
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MWSSYLNGFKTYLQLERSLSAHSIAAYLHDIEKLIQYLDSTKASSLSPTQVTLSHLQGCV
QWIAELGMTATSQARIISGIKAFYKYLLLENIITEDPTQLLEAPKTSRKLPDVLSFEEIE
QIIGCIKAGTPEGQRNRAILETMYSCGLRVSEVIALKISQLHFDAGFIRVVGKGDKERLV
PIGSAAIKYINIYKDEVRVHMPIKKGQEDFLFLNRRGSALSRIMIFLVIKELAAAAGINK
QVSPHTFRHSFATHLVEGGADLRAVQEMLGHESITTTEIYTHLDREYLRDTLQRFHPGFR
TSS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctcctatctcaatggctttaagacttatctgcaactcgaacgttcgctctct
gcccattccatcgccgcttatctgcacgatatagaaaaactcatccaatacctcgatagt
acgaaagcgtcctcgctgtctcctacgcaggtcaccttatcgcacctgcaaggttgtgtg
caatggattgcggaactggggatgaccgccacttcacaagcgcgtatcatttccggcatc
aaagcattctacaaatacctgctgctggaaaatatcatcaccgaagatcctacccagttg
ctggaagctcccaagacctcccgcaagctgccggatgtgctgagtttcgaagagatagaa
cagatcatcggttgtatcaaagcaggtaccccggaagggcaacgtaaccgtgctatcctg
gaaaccatgtacagctgcggactgcgcgtgagcgaggtcatagccctcaaaatatcacag
ctgcatttcgatgccggcttcatacgggtagtgggtaaaggagataaagaacggctcgta
cctatcggtagcgccgctatcaagtatatcaatatctataaagacgaggtaagggtacat
atgccgatcaaaaaaggacaggaagatttcctcttcctcaaccgcagaggcagcgcccta
agccgtatcatgatcttcctcgtgatcaaggagctggcagctgctgccggcatcaataag
caggtatctccgcataccttccgccactccttcgccacccacctggtagaaggcggcgcc
gacctgcgggccgtccaggaaatgttaggccatgaaagcatcaccaccactgagatatat
acccacctcgaccgggaatacctgcgcgataccttgcagcgtttccatccgggattcagg
acttcttcataa
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