Chitinophaga pendula: KTO58_10400
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Entry
KTO58_10400 CDS
T08407
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_10400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_10400
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_10400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_40
HTH_20
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UCJ09574
LinkDB
All DBs
Position
complement(2976119..2976682)
Genome browser
AA seq
187 aa
AA seq
DB search
MGDTAYTQLLIERIATLADQNAYKELFRTFYKPLSQFADSILRNKESAEEVASDVFVNVW
KNRERLLNIANIKVYLYVSTKNTALNYLAREQKTKHFSLDDLTVEVSLSDISPEELLISR
EMMRKLQIAVNSLSPKRKLIYKLIREDGLRYKEVAQILDISVNTIDVHMAHATKHIVKCM
TLTINKL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgggggacacagcctatacacaattactaatagaaaggatcgctaccttggcagaccaa
aatgcctataaggagctgttccgtaccttctacaaaccactcagccaattcgcagattcc
atccttagaaacaaagagtctgccgaagaagtggcctccgacgtttttgtgaacgtctgg
aaaaaccgcgaacgcctcctcaacattgctaacatcaaagtatacctctacgtctccacc
aaaaacaccgccctcaactatctcgcccgcgaacaaaaaaccaaacatttcagcctcgat
gacctcaccgtcgaagtatctctctccgatatctccccggaagaactcctcatctcccgc
gaaatgatgcgcaaactccaaatcgccgtcaacagcctctccccaaaacgcaaattaatc
tataaactaatccgcgaagatggcctccgctacaaagaagtcgcccagatactcgatatc
tctgtcaatactatcgatgtccatatggcacatgcaaccaaacatattgtgaaatgcatg
acgttgactattaataagttgtaa
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