KEGG   Chitinophaga pendula: KTO58_10415
Entry
KTO58_10415       CDS       T08407                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf  Chitinophaga pendula
Pathway
chf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KTO58_10415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chf03021]
    KTO58_10415
Transcription machinery [BR:chf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KTO58_10415
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 GerE HTH_40 HTH_24 HTH_20 HTH_10 HTH_23 PF0610-like_N DUF1492 HTH_22
Other DBs
NCBI-ProteinID: UCJ09577
LinkDB
Position
2977953..2978492
AA seq 179 aa
MLPLSNTEIVQGIRNRDREIYGIVFKEYSPAMFSIAFRYLKDQDEARDMVQDVFLNLWRT
ADNLDERAPLQHYLARATVNTCLNRIKKNQRQQQYTKEQLHTTAPAAESLSLEYKELEAK
YHAILEKLPDQCRRVFEMSRFSGLSPTEISTQLNISINTVYTHLTNALKRIRVELLNQQ
NT seq 540 nt   +upstreamnt  +downstreamnt
atgttgccgcttagtaatacagaaattgtgcagggtatccgtaacagggatcgggagata
tatgggattgtgtttaaggaatattcgccggctatgttcagtattgcctttcggtatttg
aaggaccaggatgaggcgcgggacatggtacaggatgtatttctcaatttgtggcgtacg
gcggacaatctggatgagcgtgcgccattgcagcattatttggcgcgagccacggtgaat
acctgtctaaaccgtatcaagaagaaccagcgacagcaacagtatacgaaggagcagctg
catactactgcgccagctgcggagagtttatccctagagtacaaggaattggaagcgaaa
tatcacgcaatattagagaagttgccggaccagtgccggcgggtatttgaaatgagccgt
ttcagtggattatcccctactgagatttcgacccagctgaatatatctattaatacggtg
tatactcatctaacgaatgccttaaaaaggatccgcgtggaactactcaaccaacaatag

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