Chitinophaga pendula: KTO58_10415
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Entry
KTO58_10415 CDS
T08407
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_10415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_10415
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_10415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
HTH_40
HTH_24
HTH_20
HTH_10
HTH_23
PF0610-like_N
DUF1492
HTH_22
Motif
Other DBs
NCBI-ProteinID:
UCJ09577
LinkDB
All DBs
Position
2977953..2978492
Genome browser
AA seq
179 aa
AA seq
DB search
MLPLSNTEIVQGIRNRDREIYGIVFKEYSPAMFSIAFRYLKDQDEARDMVQDVFLNLWRT
ADNLDERAPLQHYLARATVNTCLNRIKKNQRQQQYTKEQLHTTAPAAESLSLEYKELEAK
YHAILEKLPDQCRRVFEMSRFSGLSPTEISTQLNISINTVYTHLTNALKRIRVELLNQQ
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcttagtaatacagaaattgtgcagggtatccgtaacagggatcgggagata
tatgggattgtgtttaaggaatattcgccggctatgttcagtattgcctttcggtatttg
aaggaccaggatgaggcgcgggacatggtacaggatgtatttctcaatttgtggcgtacg
gcggacaatctggatgagcgtgcgccattgcagcattatttggcgcgagccacggtgaat
acctgtctaaaccgtatcaagaagaaccagcgacagcaacagtatacgaaggagcagctg
catactactgcgccagctgcggagagtttatccctagagtacaaggaattggaagcgaaa
tatcacgcaatattagagaagttgccggaccagtgccggcgggtatttgaaatgagccgt
ttcagtggattatcccctactgagatttcgacccagctgaatatatctattaatacggtg
tatactcatctaacgaatgccttaaaaaggatccgcgtggaactactcaaccaacaatag
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