Chitinophaga pendula: KTO58_12345
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Entry
KTO58_12345 CDS
T08407
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
chf
Chitinophaga pendula
Pathway
chf00300
Lysine biosynthesis
chf00470
D-Amino acid metabolism
chf01100
Metabolic pathways
chf01110
Biosynthesis of secondary metabolites
chf01120
Microbial metabolism in diverse environments
chf01230
Biosynthesis of amino acids
Module
chf_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KTO58_12345 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KTO58_12345 (dapF)
Enzymes [BR:
chf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KTO58_12345 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
FAIM1
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UCJ09949
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All DBs
Position
3527769..3528554
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AA seq
261 aa
AA seq
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MKQLQFYKYQGTGNDFVILDNRNGQYDGLTNAQVHQLCDRRFGIGADGLMLLNAQEGYDF
GMKYYNADGNEGSMCGNGGRCLVAFAKKMGIDKETLRFLAVDGPHDASIAGTEWVNLKMQ
DVDYVEQGPAYYYLNTGSPHFVKYVNNLETLDVYSEGRQIRYNDRFAAEGTNVNFVQPTE
KGIYVRTYERGVEDETYSCGTGVTAAALTFAGETLQSYVIPVQTLGGQLEVKFEKTGERS
FSNIWLCGPAKLVFEGQVDVN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgcagttttataaatatcaagggaccggtaacgattttgttatactggac
aacaggaatggccagtatgatggacttaccaatgcacaggtacatcagttgtgcgaccga
cggtttgggattggagcggatgggcttatgttgctgaatgcgcaggaagggtatgatttc
ggcatgaaatattacaatgcggacggtaatgaaggtagcatgtgcggtaatggagggcgt
tgtctggtagcctttgccaagaagatgggtattgacaaggaaaccttacgtttcctggcg
gtcgacggccctcacgatgccagtatagccggtacggaatgggtgaatcttaaaatgcag
gatgtagactatgtggagcaaggacctgcctactactatttgaatacaggctccccacat
tttgttaaatatgtgaacaatctggaaacgctggatgtatatagcgaaggccggcagatc
aggtataacgaccgttttgcggcagagggtaccaatgtaaactttgtacagcctacagaa
aaaggtatttatgttcgcacctatgaacgtggtgtagaggatgagacctactcctgcgga
acgggtgttacggcagccgccttaacatttgccggagaaactttacagtcctatgtgata
ccggtacagacattaggtggacagctagaggtaaaattcgaaaaaaccggggagcggtcc
ttcagtaatatctggttatgtgggcctgccaagttggtatttgagggacaggtcgatgtt
aattaa
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