Chitinophaga pendula: KTO58_13270
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Entry
KTO58_13270 CDS
T08407
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_13270
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_13270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Xre-like-HTH
Sigma70_ECF
TnsD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UCJ10122
LinkDB
All DBs
Position
3759946..3760551
Genome browser
AA seq
201 aa
AA seq
DB search
MEGNSHDIMLLRSLADGSMAAFDTFYHRYKQAVYANIYKMVRQSEAAEDLLQEVFIALWQ
HRHRLDAERSVSGWLFVVSYNKAASYLKQQLRAGVVHVPTEALAQTLPAEEQEPDELYQV
QLAVIEAAIDRLPARKQAVFRLCKLEGKSYEEVAATLHLSVPSVKDYLKQSTRLIKHYIH
SEYSSTPLTAVALLALVLDQL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaacagtcatgacatcatgttactgcgatcgcttgcagatgggagtatggcc
gcttttgatactttttaccatcgttacaagcaagctgtgtatgccaacatttacaagatg
gtacggcaatcagaggcggcagaggatctgctgcaggaggtgtttattgcgttgtggcag
catcgtcaccggttggatgccgagcgatctgtgagcggctggttgtttgtagttagttac
aataaagccgccagttatctaaagcaacagttacgtgcgggggtggtgcatgtacctacg
gaagcgcttgcgcagactttaccagcagaagagcaggagcctgatgagttataccaggtg
cagctggcagtgatagaggcggcgatagaccgtttaccagccaggaaacaagctgtattc
cgtctttgtaagctggaaggtaaaagttatgaggaggtggcagccaccctacatttgtca
gtaccttctgtaaaggattatctgaaacagtctacccgtcttatcaaacattatattcat
agtgagtattcttccacacctctaactgctgtggctttgttagctttggtattagaccag
ctgtag
DBGET
integrated database retrieval system
