Chitinophaga pendula: KTO58_13300
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Entry
KTO58_13300 CDS
T08407
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_13300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_13300
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_13300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
Sigma70_ECF
HTH_24
PhyR_sigma2
TnsD
Xre-like-HTH
MqsA_antitoxin
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UCJ10128
LinkDB
All DBs
Position
3768303..3768860
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AA seq
185 aa
AA seq
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MQVLLTKISRNNDQLAFRQLFMTYCDRLIGFAAALVPSREEAEEVVSDVFVKLWQQREQL
AGIQHLNAYLYRAVRNTAYNYRQRSGENLQILEGEYIQVLLHTAAITPEEALISKENLQR
ITQAINALPPRCKLIFRLVKEDGLKYREVADILDISINTVNTQMAAALKKLSAVIASQPH
SDWFR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattgctgaccaaaatctccaggaacaatgatcaactagccttccggcagtta
tttatgacttactgtgaccggctgatcggatttgctgccgcattggttccctcgcgggag
gaagcggaagaagtggtatctgatgttttcgttaagttatggcaacagcgggagcaactg
gcaggcattcagcacctgaatgcctatttatacagggcagtacgtaacaccgcctacaat
taccggcagcgtagcggcgagaatcttcagatactcgaaggtgaatatatacaggtattg
ttacataccgctgccattacaccagaggaagcccttatcagcaaagagaacctgcaacgc
attactcaagccatcaatgcacttcccccccgttgtaaactgatctttcggttggtaaaa
gaagacggtttgaagtaccgggaggtagccgatatcctggacatatctatcaatactgtt
aacacgcaaatggctgctgccctcaagaaattatccgcagttattgcatcccaaccccac
tcggactggttccgttaa
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