KEGG   Chitinophaga pendula: KTO58_13300
Entry
KTO58_13300       CDS       T08407                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf  Chitinophaga pendula
Pathway
chf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KTO58_13300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chf03021]
    KTO58_13300
Transcription machinery [BR:chf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KTO58_13300
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 GerE Sigma70_ECF HTH_24 PhyR_sigma2 TnsD Xre-like-HTH MqsA_antitoxin DNA_pol3_delta
Other DBs
NCBI-ProteinID: UCJ10128
LinkDB
Position
3768303..3768860
AA seq 185 aa
MQVLLTKISRNNDQLAFRQLFMTYCDRLIGFAAALVPSREEAEEVVSDVFVKLWQQREQL
AGIQHLNAYLYRAVRNTAYNYRQRSGENLQILEGEYIQVLLHTAAITPEEALISKENLQR
ITQAINALPPRCKLIFRLVKEDGLKYREVADILDISINTVNTQMAAALKKLSAVIASQPH
SDWFR
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcaggtattgctgaccaaaatctccaggaacaatgatcaactagccttccggcagtta
tttatgacttactgtgaccggctgatcggatttgctgccgcattggttccctcgcgggag
gaagcggaagaagtggtatctgatgttttcgttaagttatggcaacagcgggagcaactg
gcaggcattcagcacctgaatgcctatttatacagggcagtacgtaacaccgcctacaat
taccggcagcgtagcggcgagaatcttcagatactcgaaggtgaatatatacaggtattg
ttacataccgctgccattacaccagaggaagcccttatcagcaaagagaacctgcaacgc
attactcaagccatcaatgcacttcccccccgttgtaaactgatctttcggttggtaaaa
gaagacggtttgaagtaccgggaggtagccgatatcctggacatatctatcaatactgtt
aacacgcaaatggctgctgccctcaagaaattatccgcagttattgcatcccaaccccac
tcggactggttccgttaa

DBGET integrated database retrieval system