Chitinophaga pendula: KTO58_15620
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Entry
KTO58_15620 CDS
T08407
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_15620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_15620
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_15620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_11
HTH_40
HTH_23
HTH_Mga
HTH_24
wHTH_Par
RPA_C
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UCJ05125
LinkDB
All DBs
Position
4410367..4410969
Genome browser
AA seq
200 aa
AA seq
DB search
MEKLSDQRLLDLIRTGNHPAFTTLVNRHWEALYRYTCSRIRQEADAVDIVQEIFISCWNN
RDTLYTDANDSLASWLFKAARYCIIDHYSRPHTTIYNEALLEATLQELADNATTVQLEFK
ELQQRLEAEIALLPDRLRIPYRMSRDTGLRLREIAEQLSLSEQTVKNNISAALQHLRMRL
QHDDALSVLLLMILLQSHSH
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctttcggatcaacggctcctggacctgatacggaccggcaatcatcctgct
ttcaccacacttgtgaaccggcattgggaggcattgtacaggtatacctgttcccgcata
cggcaggaagctgatgcggttgacatcgtgcaggagatatttatcagctgctggaataac
cgggatacgttatatacggatgcgaatgacagcctggcatcgtggttattcaaggcggcg
cggtactgtattattgatcactattcgcgtcctcatacgactatttataatgaggcattg
ctggaggctactttacaagaattagcggacaatgccactactgtacagttagagttcaaa
gagttacaacaaaggctggaggcggagatcgccttattacctgaccggttgcggatacca
taccgtatgagccgggatacgggtttgcgtttgcgggagatcgcggagcagttatcgctt
tcggagcaaacggtcaagaataatatcagtgcggctttgcaacatttaaggatgcggttg
cagcacgatgatgcgttatctgtattgttgctgatgatccttttacaatctcattctcac
tag
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integrated database retrieval system
