KEGG   Chitinophaga pendula: KTO58_15900
Entry
KTO58_15900       CDS       T08407                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
chf  Chitinophaga pendula
Pathway
chf03030  DNA replication
chf03430  Mismatch repair
chf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:chf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KTO58_15900
   03430 Mismatch repair
    KTO58_15900
   03440 Homologous recombination
    KTO58_15900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chf03032]
    KTO58_15900
   03400 DNA repair and recombination proteins [BR:chf03400]
    KTO58_15900
Enzymes [BR:chf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KTO58_15900
DNA replication proteins [BR:chf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KTO58_15900
DNA repair and recombination proteins [BR:chf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KTO58_15900
SSDB
Motif
Pfam: RNase_T ExoX-like_C Rv2179c-like RNase_H_2 T4_Spackle QSregVF_b
Other DBs
NCBI-ProteinID: UCJ05178
LinkDB
Position
4473593..4474366
AA seq 257 aa
MPSLQLKRPLAVIDLETTGTNIATDRIIEIAIIKVFPDKSVQSKVKRINPGIPIPAVTTA
IHGISNEDVKDSPTFKQVANEMRQFLENCDIAGYNSNRFDIPMLVEEFLRAELDFDVSNR
KFIDVQKIFHLMEKRTLSAAYKFYCDKQLENAHSAEADALATYEILEAQLGRYESLQTDV
DGLADFTREDEYVDFARRIAMQNGTEVFNFGKYKGRPVREVLKIEPQYYDWMMKADFPLN
TKQKLTEIYHNMMLKKI
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccctctttgcagctgaaaagaccactggcggtgatagacctggagacaaccggcacc
aatattgccactgaccgcatcatcgaaattgcgatcattaaagtcttcccggacaaatcc
gtacagtctaaagtaaaacgtatcaacccgggcatccccattccggcggtaaccaccgcc
atccatggcatcagcaacgaagacgtaaaagacagccctaccttcaaacaggtagcaaac
gaaatgcgccaattcctcgaaaactgcgatatcgcaggctataattccaatcgattcgac
attcccatgctggtagaagaattcctgcgtgctgaacttgacttcgatgtgtctaaccgt
aaattcatcgatgtacagaagatattccacctgatggaaaaaagaaccctcagcgcggcc
tataaattctattgcgataaacaactggaaaatgcacatagcgcagaagcagatgcgctg
gctacctatgagatcctggaagcgcaactcggacgctatgaaagcctgcaaaccgatgta
gacggactcgccgacttcacccgtgaagacgaatacgtcgacttcgcccgccgcatcgcc
atgcaaaacggtacagaagtattcaacttcggaaaatacaaaggccgccccgtaagagaa
gtgttaaaaatagaaccacagtactacgactggatgatgaaggccgatttccctttgaat
accaagcaaaaactaacagagatataccataatatgatgttaaaaaaaatttaa

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