Chitinophaga pendula: KTO58_21330
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Entry
KTO58_21330 CDS
T08407
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
chf
Chitinophaga pendula
Pathway
chf00020
Citrate cycle (TCA cycle)
chf00640
Propanoate metabolism
chf00660
C5-Branched dibasic acid metabolism
chf00720
Other carbon fixation pathways
chf01100
Metabolic pathways
chf01110
Biosynthesis of secondary metabolites
chf01120
Microbial metabolism in diverse environments
chf01200
Carbon metabolism
Module
chf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KTO58_21330 (sucD)
00640 Propanoate metabolism
KTO58_21330 (sucD)
00660 C5-Branched dibasic acid metabolism
KTO58_21330 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
KTO58_21330 (sucD)
Enzymes [BR:
chf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KTO58_21330 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UCJ06192
LinkDB
All DBs
Position
complement(5780374..5781258)
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AA seq
294 aa
AA seq
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MSVLVNKHSKVIVQGFTGTEGTFHATQMIEYGTQVVGGVTPGKGGTSHLERPVFNTVADA
VKATGADVSIIFVPPAFAADAIMEAAEAGIALVVCITEGIPVQDMVKAKSFLQGRTTRLI
GPNCPGVITAEEAKVGIMPGFIFKKGRIGIVSKSGTLTYEAADQVVKAGLGISTAIGIGG
DPIIGTPTKDAVELLMNDPETEGIIMIGEIGGSMEAEAAQWIKANATKPVVGFIAGQTAP
PGRRMGHAGAIIGGADDTAAAKMKIMAECGVHVVESPANIGKTMAEVLSKATAK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttagttaataagcatagcaaagtgattgtgcagggatttaccggtacggaa
ggtacattccatgctactcagatgatagaatacggtacacaggtagtaggcggcgttaca
cccggtaaaggaggcacttcccacctggagcgtccggtgttcaataccgtagcagatgcg
gtaaaggccacaggagcagatgtttctatcatttttgtaccaccggcatttgccgctgac
gcgatcatggaagctgccgaagctggcatcgccctggtagtatgtatcaccgaaggtatc
cccgtacaggacatggtaaaagcaaaaagcttcctccaaggccgtactacacgcctcatc
gggcctaactgccccggtgtgatcaccgcagaagaagctaaagtaggtatcatgcccggt
tttatattcaaaaaaggccgcatcggtatcgtatctaaatccggtactctcacctatgag
gctgctgatcaggtagttaaagctggtttaggtatctctaccgctatcggtatcggtggc
gaccccatcatcggtacacccaccaaagatgccgtggaactgctcatgaacgatcccgaa
acagaaggtatcatcatgatcggtgagatcggtggtagcatggaagccgaagccgctcag
tggatcaaagccaacgctactaaacccgtagtaggcttcatagccggtcaaactgcccct
cccggccgccgtatgggacacgccggtgccatcatcggtggcgcagatgatactgccgcc
gctaaaatgaagatcatggcagaatgtggcgttcatgtagtggaaagccccgctaacatc
ggtaaaacaatggccgaagtacttagcaaagccaccgctaaataa
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