Chitinophaga pendula: KTO58_21420
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Entry
KTO58_21420 CDS
T08407
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
chf
Chitinophaga pendula
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chf03009
]
KTO58_21420
Enzymes [BR:
chf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
KTO58_21420
Ribosome biogenesis [BR:
chf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KTO58_21420
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UCJ06210
LinkDB
All DBs
Position
5805160..5806491
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AA seq
443 aa
AA seq
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MKKNKPAVKGFSPFKENKSHSNKPGRPDVGVERAGRKPARLLEKGERGDKGEKIERREKR
EQSEGAGTERGNKPTFRGKGTEGGFRGNKSEGFRGNKPDTFRDNKSEGFRDGNKSESFRD
NKSEKREKTPVQRGGAGKSFKDTPRETPSGFNRKKYFDNTNERFAEKQDRKQASRQQRSE
HDGEVKETVPYKKTARKQSAEGNGVAGEMPLNKYLAHCGICSRRKAVDHIKAGKVTVNDQ
VVMEPAFKVTDKDNVKLVGKKIHIQKNLVYILLNKPKGYITTTDDPEGRQTVMELIADAT
EERVYPVGRLDRNTSGLLLLTNDGELAQKLAHPKHNIKKIYQVGLDKALTKADFEKILNG
VPLEDGVALVDALGYIDPKNKAEVGIEIHSGKNRIVRRIFEHLEYSVEKLDRVMYAGLTK
KNVNRGRWRFLTEKEIILLKHFK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacaaacctgccgtgaaaggcttttctccatttaaagagaataaatcccat
agcaacaagccaggtcgtccggacgttggtgttgagcgtgcggggcgcaaacctgcccgt
ctattagagaaaggggaaagaggagataagggagaaaaaattgagagaagggagaaacgg
gagcaatccgaaggtgctggtacagaaagaggtaacaaacctacctttcgtggcaaaggc
actgagggtggtttccgaggtaataaatcagaaggtttccgtggtaataagcctgacact
ttccgcgataataaatctgagggcttccgcgatggtaacaaatcggagagcttccgtgat
aacaaatctgaaaagagggaaaaaacgcctgttcagcgtggtggtgcagggaaaagcttc
aaggatactccgcgggagacgcccagcggatttaaccggaagaaatattttgacaatacc
aatgagcggtttgcggagaagcaagatcgtaaacaagccagcaggcagcagcgcagcgag
catgatggagaagtgaaagagacggtcccttataaaaagactgccaggaagcaatcggct
gaaggaaatggagtggctggggaaatgccattgaataaatatcttgctcactgcggcatt
tgttcccggaggaaagcggtagaccatatcaaagcgggcaaagtaacggttaacgatcag
gtggtaatggaacccgctttcaaggtaacggacaaggataatgtaaaactggtaggtaag
aaaatacatatacagaagaacctggtatatatactgctgaataaacctaaggggtatatt
actacgacagatgatcccgagggtcgccagacggtgatggagctgatcgctgatgcgact
gaggagcgggtatatcctgtgggacgtctggacaggaatacttcggggttattattgttg
actaatgatggagagctggcgcagaagctggcgcatccgaaacacaatatcaaaaagatc
taccaggtagggctggacaaggcgcttaccaaagcagactttgaaaagatactgaacggt
gtaccactggaagacggtgtggcgttggtggatgcgttgggatatattgatcctaagaac
aaagccgaagtagggatagagatccatagtggtaagaaccgtattgtgcgccgtatattc
gagcacctggagtacagtgtggaaaagctggatcgtgtgatgtatgccggtcttaccaag
aagaatgtcaacaggggcagatggcgtttcctgacagagaaggaaatcatattactgaag
cattttaaatag
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